Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq20 159 4e-34 seq14 82.4 9e-11 >seq20 Length=3442689 Score = 159 bits (176), Expect = 4e-34 Identities = 166/215 (77%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 102165 |||| || || ||| ||||| || |||||||| || |||||| | | ||| ||| Sbjct 3346885 CAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGT 3346944 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 || |||| ||| |||| ||| | || || || |||||||||||||||||||| | Sbjct 3346945 CGA---CCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCG 3347001 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 |||||||| | || | |||||||||||||| ||||||||||| |||||| ||||| Sbjct 3347002 GTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCT 3347061 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||||| ||||||||||||||||| || ||| Sbjct 3347062 CCAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 3347096 >seq14 Length=2507526 Score = 82.4 bits (90), Expect = 9e-11 Identities = 218/324 (67%), Gaps = 17/324 (5%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTG 16032 ||||||||||| || || | | |||||| | || || |||||||| || ||| | Sbjct 1556279 AAACCATCCATTTCGGTAAGGATCTGGTTCAGGGTGCTCTCGCGTTCATCGTTACCGCCG 1556338 Query 16033 GCATACCACCAGCACTGCG---TTGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACG 16088 | || | | || || ||| ||| || | |||||||| ||||| ||||||| Sbjct 1556339 CCGTAGTTCGA---CTTCGCTCTTGATTTACCGATAGCATCAATTTCATCGATGAAGATA 1556395 Query 16089 ATGCATGG--TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCA 16146 ||||| || | ||||| |||| || | || ||||| || || || | || | Sbjct 1556396 ATGCAGGGCGTCGATTTCCGCG--CGTTGGCGAACAGATCACGAACTCGGGAAGGACCGA 1556453 Query 16147 CACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAGA 16204 |||| ||||||||||| ||||| | | | | | ||| | || |||||| || || Sbjct 1556454 CACCGACAAACATCTCGACAAACTCCGAACCACTG-ACACT-GAAGAAGGGCACGCCGGA 1556511 Query 16205 TTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAG 16264 |||||| || |||| ||| || | |||||||| ||||| || ||||| || | Sbjct 1556512 TTCACCAGCCGTGGCCTTGGCAAGTAACGTCTTACCGGTACCCGGAGGACCCGAAAGAAT 1556571 Query 16265 GGCACCTCGTGGAATCTTGGCGCC 16288 |||||| || || || ||||| || Sbjct 1556572 GGCACCACGGGGGATTTTGGCACC 1556595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742221536560