Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq20 100 3e-16 seq14 96.9 4e-15 seq3 86.0 7e-12 seq16 84.2 3e-11 seq15 82.4 9e-11 >seq20 Length=3442689 Score = 100 bits (110), Expect = 3e-16 Identities = 150/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || |||||||||||||| || |||| || ||||||||||| || Sbjct 3347095 TGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCA 3347036 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | || || || |||||||| ||||| || Sbjct 3347035 CGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGCA 3346976 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 |||||||| | ||||||| ||| |||||||| | |||| || |||||| | || Sbjct 3346975 GCGAAAGCAACGAGACGCTGAGC-GAAGGTCGACTCCCTGTCCTGGATCCACTTAATGGC 3346917 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||| | |||||| | ||||||||||| Sbjct 3346916 CCAATCGGCCTTCTTGGCAATGCAGGGGAC 3346887 >seq14 Length=2507526 Score = 96.9 bits (106), Expect = 4e-15 Identities = 222/327 (68%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGT-TGGTTGGCACGTGCCTG 11732 ||||||| ||| ||||| ||||||||||| | || || || | | | | || || | Sbjct 1556363 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTC-CGCGCGTT 1556421 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || ||||| || || | || ||||| || |||||||| || || | | Sbjct 1556422 GGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGA 1556481 Query 11793 GGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 || |||||||| |||||| || || |||||||| |||| || || | | Sbjct 1556482 ACCACTGACACTGAA-GAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACG 1556540 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 ||||||| ||||| || | ||| | |||| ||| ||||||||||| |||||||| || Sbjct 1556541 TCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACCCAGCT 1556600 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | |||| || || ||||| |||||| || | ||| | |||| |||| || Sbjct 1556601 TC--TGGAAGCGTTCCGGGTTCTTCAGGAAGCTGACGAATTCCATGATTTCCACCTTAGC 1556658 Query 11970 GGAGTCGATACCCTCAACATCGGTGAA 11996 || ||||| | || |||| ||| Sbjct 1556659 TTCATCCATACCAGCCACGTCGGAGAA 1556685 >seq3 Length=5003481 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 3598040 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 3598099 Query 136776 TGGGAACAGCTTTTAGATATATTTT 136800 ||||| || ||||| | | | |||| Sbjct 3598100 TGGGACCATCTTTTTGCTTTTTTTT 3598124 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 3599359 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 3599300 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 3599299 TGGGACCATCTTTT 3599286 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 4475371 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 4475312 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 4475311 TGGGACCATCTTTT 4475298 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 4476126 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 4476185 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 4476186 TGGGACCATCTTTT 4476199 >seq16 Length=669342 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 456493 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 456434 Query 136776 TGGGAACAGCTTTT 136789 ||||| || ||||| Sbjct 456433 TGGGACCATCTTTT 456420 >seq15 Length=1968199 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||| ||| |||||| ||| ||| ||||||||||||| Sbjct 1326144 ATAGCTCAGTTGGTTAGAGCGTGACGCTAATAACGTCAAAGTCGAGGGTTCGAGCCCCTC 1326085 Query 136776 TGGGAACA--GCTTTTAGATATATTTTTT 136802 ||||| || ||||| | | | |||||| Sbjct 1326084 TGGGACCATCTCTTTTTGCTTTCTTTTTT 1326056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975830669400