Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 168 8e-37 seq20 98.7 1e-15 seq14 86.0 7e-12 >seq4 Length=2618736 Score = 168 bits (186), Expect = 8e-37 Identities = 586/913 (64%), Gaps = 66/913 (7%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 |||||||| | || || | ||||| ||||| ||||||| | | ||||||| | Sbjct 314097 GGAAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATG 314156 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| || || || || | ||||| ||||| ||||| ||| Sbjct 314157 ATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTG 314216 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| |||||| |||| | || ||||| ||||| | || ||||| Sbjct 314217 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATA 314276 Query 106637 GCCTTCCACA-CATCGGCG----GCTGGTACAATGGCGTTGGCC--------CGTCCCTC 106683 || | ||| | | || | | | |||||| | ||| |||| ||| ||| Sbjct 314277 GCGTACCAGAGCTTCTGAGCCTTGATGGTACGACGGCCACGGCCTTCCTTCTCGTACCTA 314336 Query 106684 C----------GCCT--------------------------CGTACTTTGTGTAGAGGGC 106707 | || | | ||||| ||||||||| Sbjct 314337 CAATACTATTAGCATGAGTTGAGAATACACGAACCAACAAACTTACTTCTCGTAGAGGGC 314396 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 106767 || ||||| ||||| | || | | || || || | || || ||||| |||| Sbjct 314397 GTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGT 314456 Query 106768 CCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAA 106827 ||| | || | ||||||| ||||||||||| || || ||| ||||||||| | || Sbjct 314457 CCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAA 314516 Query 106828 GAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 ||||| | | | || |||| || | ||| ||||| || | || |||||||| | Sbjct 314517 CAGATCGCGGGCTCTGA-CCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGA 314575 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 || ||||| |||||| |||||||| |||| || | || || ||||| | Sbjct 314576 AGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACC---GGGACGCTTGTTGC 314632 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || | || ||| ||| || || |||||||| |||| || ||| | Sbjct 314633 CACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGT 314692 Query 107001 CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCA 107060 || ||| || || || | ||| |||| | | | | || | || || Sbjct 314693 TGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCA 314752 Query 107061 TCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 |||||||| || || ||| ||||| | ||||| | | | | | ||| | ||||| Sbjct 314753 GACCAATACCACCGGCGGTCTTGGAGATCATAGCGCA-AGT-CTTCAAAGTGTCGTAGAT 314810 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||||| || ||||||||| || ||| ||||||||| || | ||| || || Sbjct 314811 ACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGG 314870 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGT 107237 |||||||| ||||| || || || | |||||| |||| ||| | ||||||||| || Sbjct 314871 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTGGGACATCAAGT 314929 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||| ||||| | | | || ||||| |||||||| || | ||| |||||||| | Sbjct 314930 GGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCA 314989 Query 107298 ACATGTATTGGGG 107310 || || ||||| Sbjct 314990 GCAGGTGCTGGGG 315002 >seq20 Length=3442689 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| |||||||| || || || || || || || |||||| || || ||||||||||| Sbjct 3347096 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 3347037 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | ||| || |||||||||||||||||||| || Sbjct 3347036 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 3346977 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| || |||| ||||||| ||| | ||| | | ||| || || | Sbjct 3346976 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 3346918 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 |||| | |||||||| |||| || || || Sbjct 3346917 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 3346887 >seq14 Length=2507526 Score = 86.0 bits (94), Expect = 7e-12 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Plus Query 9372 GCATCAATCTCATCAATGAAGACAATACATGG--TTGATTTTCGCGGGCGATTTCAAAGA 9429 |||||||| ||||| ||||||| ||| || || | ||||| |||| || | | || | Sbjct 1556372 GCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCG--CGTTGGCGAACA 1556429 Query 9430 GATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG--CGGCGGA 9487 |||| ||||| | | || ||||| ||||||||||| ||||| | | | | | Sbjct 1556430 GATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTCCGAACCACTG- 1556488 Query 9488 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9547 ||| | || |||||| || |||||||| || |||| ||| || | |||||||| Sbjct 1556489 ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGTAACGTCTTACC 1556547 Query 9548 CGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||| || ||||| || | |||||| || || || ||||| || Sbjct 1556548 GGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 1556595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980630380520