Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq20 199 7e-46 seq4 134 3e-26 >seq20 Length=3442689 Score = 199 bits (220), Expect = 7e-46 Identities = 353/510 (69%), Gaps = 21/510 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| ||| ||| |||||| ||| Sbjct 3347399 CTGGTAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 3347340 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTC----AGGCCCATCTGTTC 47952 ||||||| ||||||||||| | ||| || | | ||| ||| ||| | Sbjct 3347339 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCA------C 3347286 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||||| | |||||||| |||||||||| | |||| || || ||||||||| | Sbjct 3347285 CAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAG 3347226 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 || | ||||||| ||| | || || ||||||| ||| || ||||| || | | Sbjct 3347225 CAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGAT 3347166 Query 48073 AATCTGCTTAACG--CGGGACTCTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129 || | | ||| | | ||| || | ||||| |||||| || | |||| Sbjct 3347165 GATGTCTTCAACAACCTGTTTGCTGGGGCGGTTGTT---CAGGTG---GGAGAACAGCAG 3347112 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || ||||| |||||| || ||||| || ||||||| ||||||||||| ||| Sbjct 3347111 GCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 3347052 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||||| || | || ||||||||||| || | ||||| || || |||||||| Sbjct 3347051 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAA 3346992 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || ||||| || ||| | || |||| | | | | |||| Sbjct 3346991 GATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 3346932 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 |||||| || ||||| || |||||||| Sbjct 3346931 GATCCACTTAATGGCCCAATCGGCCTTCTT 3346902 >seq4 Length=2618736 Score = 134 bits (148), Expect = 3e-26 Identities = 301/449 (67%), Gaps = 5/449 (1%) Strand=Plus/Plus Query 213793 TCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 ||||||| |||| | ||| || | || ||||||||| ||||| |||||| || | Sbjct 314456 TCCAGTCGCCGTTCGCCTCA-ACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAG 314514 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 ||||| || | || || ||| ||| || ||| || || || || || || || Sbjct 314515 AACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCG 314574 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCG 213968 |||| |||| |||||| ||||| | |||||||||||| || || | || | ||||| Sbjct 314575 AAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCA 314634 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 |||||||| || ||||| ||||||| | || || | ||| || || |||||| Sbjct 314635 CCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTG 314694 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGC 214088 || |||||||| || | || || || |||| | | | | | || | || Sbjct 314695 GAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGA 314754 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || || ||||||||| |||||||||||| ||||| | ||| ||| || ||| ||| Sbjct 314755 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 314814 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG 214208 | |||||||| || | | || | | |||||| | ||||| ||| || | Sbjct 314815 TCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTA 314874 Query 214209 CCAGAGTTGAAAAGCGTGGGGCTGGCATG 214237 |||| |||||| || || ||| ||| || Sbjct 314875 CCAGCGTTGAACAGAGTCGGGGAGGCGTG 314903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532532184320