Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq20 100 3e-16 >seq20 Length=3442689 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| || || || || || || || ||||||||||| || || || || || | | || Sbjct 2026747 CATGTTGGCAAGGAGGGCCTGGGCCGTGCAGATGTTGCTAGTGGCCTTTTCACGGCGGAT 2026806 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 |||||| || | ||||| || || ||||| | ||| | ||||| || |||| || Sbjct 2026807 ATGCTGTTCACGGGTTTGCAGGGCCAATCTCAAGGCACGGTTGCCCAGGCGGTCCTTGGA 2026866 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 ||| |||| | ||| || | ||| | ||| |||||||||| || ||||| || Sbjct 2026867 AACACCCACAACACGGCCGGGAACCTTACGCTTGTACTTGTCTGCGCAGGCGAAGAAGGC 2026926 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 || |||||||| ||||||||||| || | ||| Sbjct 2026927 GGCGTGAGGACCACCGTATCCCATGGGCACACC 2026959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998233537960