Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 seq14 100 3e-16 seq20 98.7 1e-15 >seq4 Length=2618736 Score = 118 bits (130), Expect = 1e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||||| | | ||||| |||||||| | || | ||||| ||||||||| Sbjct 314284 TGGTACGCTATTCTGGAGGCTCAGACCGAGACTGGTAACCCCTTCATGCTGTACAAGGAT 314225 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 ||||| ||||||||||| ||||| ||||| | ||||| ||| ||||| || || ||| Sbjct 314224 GCTTGCAACAAGAAGAGCAACCAGAAGAACCTCGGAACCATCCGTAGCTCCAACCTCTGC 314165 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || || || | ||||||| | | ||||||| ||||| ||||| | || || | Sbjct 314164 ACTGAGATCATTGAGTACAGTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTT 314105 Query 76058 GCCCTTCC 76065 |||||||| Sbjct 314104 GCCCTTCC 314097 >seq14 Length=2507526 Score = 100 bits (110), Expect = 3e-16 Identities = 161/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 |||||||| |||||||| || ||| |||| ||||| || ||||| || ||||| | Sbjct 1556595 GGTGCCAAAATCCCCCGTGGTGCCATTCTTTCGGGTCCTCCGGGTACCGGTAAGACGTTA 1556536 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAA 175394 || ||| |||| || |||||||| || || ||| || |||| | || | | Sbjct 1556535 CTTGCCAAGGCCACGGCTGGTGAATCCGGCGTGCCCTTCTTC-AGTGTCAGTGGTTCGGA 1556477 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||||| ||||||||||| ||||| ||| | | ||||| ||||| || | | || Sbjct 1556476 GTTTGTCGAGATGTTTGTCGGTGTCGGTCCTTCCCGAGTTCGTGATCTGTTCGCCAACG- 1556418 Query 175455 CCGCGAAAATCAA--CCATGTATTGTCTTCATTGATGAGATTGATGC 175499 |||| ||||| | || || ||| ||||||| ||||| |||||||| Sbjct 1556417 -CGCGGAAATCGACGCCCTGCATTATCTTCATCGATGAAATTGATGC 1556372 >seq20 Length=3442689 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066 || || || |||| |||||||| | ||||| || || ||| | | ||| | ||| Sbjct 3346887 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCG 3346946 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||||||| |||| || |||| || || || |||||||||||||||||||| || Sbjct 3346947 A-CCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTC 3347005 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | || | ||| | |||||||| ||||||||||| || || |||||| || Sbjct 3347006 CTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAA 3347065 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || || || || |||||||| ||| Sbjct 3347066 CGAGCTCATCTCTCGTGACGAGGGTCTGCAC 3347096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569428486240