Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30]
23 sequences; 35,738,354 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 2e-23
seq6 113 1e-19
seq20 105 2e-17
>seq4
Length=2618736
Score = 125 bits (138), Expect = 2e-23
Identities = 404/624 (65%), Gaps = 5/624 (1%)
Strand=Plus/Plus
Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969
||||||| ||| || | ||| | ||| | |||||||| || || | || | ||||
Sbjct 314476 ACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAACAGATCGCGGGC-TCTGAC 314534
Query 155970 -TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028
||||| | ||||| ||||| || || || | ||| || | ||| | || ||
Sbjct 314535 CTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGG 314594
Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085
||| || || || |||||| ||| | | | ||||||||||| || || || | ||
Sbjct 314595 CTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGC 314654
Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145
||| || ||||| || | ||||| |||| || ||| ||||| || || ||||| || |
Sbjct 314655 AGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACC 314714
Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205
||| | || || | ||||| | || | | || ||||||||||| | ||
Sbjct 314715 AATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACCAATACCACCGGCGGTCTT 314774
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|| || |||||| ||| | ||| | | | ||||| ||||| || || | |||
Sbjct 314775 GGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCAT 314834
Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325
| || |||| || | ||||| | || || ||||||||||| || || ||
Sbjct 314835 GTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGG 314894
Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385
| || ||| | || ||||| | ||||| | | ||| ||||| | |||||| |
Sbjct 314895 GGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGAT 314954
Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445
| | ||||| |||| | | || | |||| || ||||| |||||||| | |
Sbjct 314955 GTCACTACCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCAC 315014
Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505
| ||| | || |||| ||||||| || ||||| || || || ||||| | | |
Sbjct 315015 CTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 315074
Query 156506 CAGAAAATCACGGTTGTAATCAAT 156529
|||||||||| ||| ||||
Sbjct 315075 GTTGAAATCACGGTCGTATACAAT 315098
Score = 84.2 bits (92), Expect = 6e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || | |||||| ||| ||||| || || |||||| || | |||||||||
Sbjct 314145 CTGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGG 314204
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
|| || |||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 314205 TTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGA 314264
Query 155748 GCGTCCAGAAT 155758
|| ||||||||
Sbjct 314265 GCCTCCAGAAT 314275
>seq6
Length=3823878
Score = 113 bits (124), Expect = 1e-19
Identities = 180/252 (71%), Gaps = 6/252 (2%)
Strand=Plus/Plus
Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654
||| || || ||||| ||| || || || ||||| |||||||| | ||| | | |||
Sbjct 615400 ACGTTGGATGTAACCGGTTTCAGCGGTCTTGACAGCGGTATCAATCAAACCTTCTCTACC 615459
Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCA 302712
| |||| || |||||||| | ||| ||| || | || | || ||| || ||||
Sbjct 615460 AGCCATGGCGTGGAAGAAGAACTCAGTGGGT-GTCAAACCACGCAGGTAAG-AGTTCTCG 615517
Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772
||||| ||||||| ||||||||| | ||| |||||| ||||| |||| ||| | | |
Sbjct 615518 ACGAATCCACGCGACTCGGGCGAGTAATCGTCCTTGGTGAAGTGAGGCAAGGTACGATAC 615577
Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCAT 302831
| | ||| | || ||||||||||| || ||| ||| ||||| | ||| | | ||||
Sbjct 615578 TTGAATCCGAAAGGAATACGCTTTCCTTCGACGGACTGTTGTCCGA-CCACAGCAGTCAT 615636
Query 302832 CTGCGAAATATT 302843
||| ||||| ||
Sbjct 615637 CTGGGAAATGTT 615648
Score = 91.5 bits (100), Expect = 4e-13
Identities = 96/126 (76%), Gaps = 3/126 (2%)
Strand=Plus/Plus
Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886
||| |||||||| || ||||| |||||||| |||||||||||||||||||| ||
Sbjct 614617 ACGAGGAACACCCAAAGTGACGTT---CTTGGACGAGACACCAGCAAAGTGGAAAGTGTT 614673
Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946
|| || | || || | |||||||||||| || || |||| || ||||||||||||
Sbjct 614674 GAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGAGCAGCAAGCACACCAACCATTTC 614733
Query 301947 TCCTGG 301952
|| ||
Sbjct 614734 ACCAGG 614739
>seq20
Length=3442689
Score = 105 bits (116), Expect = 2e-17
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510
||||| | || ||||| ||||| ||||||||||||| | ||| || ||| |||
Sbjct 3346902 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 3346961
Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570
||||||||||| |||| || ||||| || || ||| ||| | ||| || || ||
Sbjct 3346962 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 3347021
Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630
||||| || ||||||||| | | ||||| || || || ||||| || || || |
Sbjct 3347022 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 3347081
Query 133631 GACGAGGCACTTCACACCGAATTTGC 133656
||||||| || |||||||| || ||
Sbjct 3347082 GACGAGGGTCTGCACACCGACTTCGC 3347107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817166273751
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |