Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4 125 2e-23 seq6 113 1e-19 seq20 105 2e-17 >seq4 Length=2618736 Score = 125 bits (138), Expect = 2e-23 Identities = 404/624 (65%), Gaps = 5/624 (1%) Strand=Plus/Plus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 ||||||| ||| || | ||| | ||| | |||||||| || || | || | |||| Sbjct 314476 ACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAACAGATCGCGGGC-TCTGAC 314534 Query 155970 -TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||||| | ||||| ||||| || || || | ||| || | ||| | || || Sbjct 314535 CTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGG 314594 Query 156029 CTCCAGATACATAGCAAAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGC 156085 ||| || || || |||||| ||| | | | ||||||||||| || || || | || Sbjct 314595 CTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGC 314654 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| || ||||| || | ||||| |||| || ||| ||||| || || ||||| || | Sbjct 314655 AGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGAGGTACCGTTGGTGCCACC 314714 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||| | || || | ||||| | || | | || ||||||||||| | || Sbjct 314715 AATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACCAATACCACCGGCGGTCTT 314774 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || |||||| ||| | ||| | | | ||||| ||||| || || | ||| Sbjct 314775 GGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCAT 314834 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || |||| || | ||||| | || || ||||||||||| || || || Sbjct 314835 GTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGG 314894 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | || ||| | || ||||| | ||||| | | ||| ||||| | |||||| | Sbjct 314895 GGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGAT 314954 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 | | ||||| |||| | | || | |||| || ||||| |||||||| | | Sbjct 314955 GTCACTACCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCAC 315014 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAA 156505 | ||| | || |||| ||||||| || ||||| || || || ||||| | | | Sbjct 315015 CTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAGGGTCTTGAAGCCGAAGAAGTTGTA 315074 Query 156506 CAGAAAATCACGGTTGTAATCAAT 156529 |||||||||| ||| |||| Sbjct 315075 GTTGAAATCACGGTCGTATACAAT 315098 Score = 84.2 bits (92), Expect = 6e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || | |||||| ||| ||||| || || |||||| || | ||||||||| Sbjct 314145 CTGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGG 314204 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || || |||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 314205 TTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGA 314264 Query 155748 GCGTCCAGAAT 155758 || |||||||| Sbjct 314265 GCCTCCAGAAT 314275 >seq6 Length=3823878 Score = 113 bits (124), Expect = 1e-19 Identities = 180/252 (71%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 ||| || || ||||| ||| || || || ||||| |||||||| | ||| | | ||| Sbjct 615400 ACGTTGGATGTAACCGGTTTCAGCGGTCTTGACAGCGGTATCAATCAAACCTTCTCTACC 615459 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCA 302712 | |||| || |||||||| | ||| ||| || | || | || ||| || |||| Sbjct 615460 AGCCATGGCGTGGAAGAAGAACTCAGTGGGT-GTCAAACCACGCAGGTAAG-AGTTCTCG 615517 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 ||||| ||||||| ||||||||| | ||| |||||| ||||| |||| ||| | | | Sbjct 615518 ACGAATCCACGCGACTCGGGCGAGTAATCGTCCTTGGTGAAGTGAGGCAAGGTACGATAC 615577 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC-GAAATCAT 302831 | | ||| | || ||||||||||| || ||| ||| ||||| | ||| | | |||| Sbjct 615578 TTGAATCCGAAAGGAATACGCTTTCCTTCGACGGACTGTTGTCCGA-CCACAGCAGTCAT 615636 Query 302832 CTGCGAAATATT 302843 ||| ||||| || Sbjct 615637 CTGGGAAATGTT 615648 Score = 91.5 bits (100), Expect = 4e-13 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886 ||| |||||||| || ||||| |||||||| |||||||||||||||||||| || Sbjct 614617 ACGAGGAACACCCAAAGTGACGTT---CTTGGACGAGACACCAGCAAAGTGGAAAGTGTT 614673 Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946 || || | || || | |||||||||||| || || |||| || |||||||||||| Sbjct 614674 GAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGAGCAGCAAGCACACCAACCATTTC 614733 Query 301947 TCCTGG 301952 || || Sbjct 614734 ACCAGG 614739 >seq20 Length=3442689 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGT 133510 ||||| | || ||||| ||||| ||||||||||||| | ||| || ||| ||| Sbjct 3346902 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 3346961 Query 133511 CTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTT 133570 ||||||||||| |||| || ||||| || || ||| ||| | ||| || || || Sbjct 3346962 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 3347021 Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630 ||||| || ||||||||| | | ||||| || || || ||||| || || || | Sbjct 3347022 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 3347081 Query 133631 GACGAGGCACTTCACACCGAATTTGC 133656 ||||||| || |||||||| || || Sbjct 3347082 GACGAGGGTCTGCACACCGACTTCGC 3347107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817166273751