Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq20 170 2e-36 seq3 122 1e-21 seq21 113 6e-19 seq4 109 7e-18 seq13 89.7 6e-12 >seq20 Length=3442689 Score = 170 bits (188), Expect = 2e-36 Identities = 183/242 (76%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| ||| | ||||||||| Sbjct 3347404 GCCTTCTGGTAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATC 3347345 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 3347344 GACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 3347285 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| |||||||||||||||||||| ||||| || || ||||||||| | Sbjct 3347284 AGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGC 3347225 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || ||||| | || ||| ||||| | ||| || ||||||||||||||||| Sbjct 3347224 AGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATG 3347165 Query 868931 AT 868932 || Sbjct 3347164 AT 3347163 Score = 118 bits (130), Expect = 1e-20 Identities = 178/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | || ||| Sbjct 3346754 GAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCAACGAGCCTCGGGAACCTGG 3346695 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||| ||| ||| ||||| Sbjct 3346694 ACCTCGCCGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAG 3346635 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || ||||| ||| |||| ||||||||||||| | | ||| ||||| | Sbjct 3346634 AACGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCG 3346575 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | || || | |||||||||||||||| |||||||||||||| ||| Sbjct 3346574 TGCAAATCCTTGGACAGATCAATTTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 3346515 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 3346514 TACATCTGCCA 3346504 Score = 113 bits (124), Expect = 6e-19 Identities = 144/195 (74%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| ||| || |||||||| || ||||| Sbjct 3347090 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 3347031 Query 869239 CTTGAGCCAAAAGATG---GCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 869295 ||||||||| |||||| ||| || || || ||||| ||||| ||||| ||||| || Sbjct 3347030 CTTGAGCCAGAAGATGGAAGCGAAGGAA---CCGGAGAAGAAGATACCCTCAACGGCAGC 3346974 Query 869296 AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355 || | | ||| |||| || ||| ||||| |||| | | ||||||||| || || Sbjct 3346973 GAAAGCAACGAGACGCTGAGCGAAG--GTCGACTCCCT-GTCCTGGATCCACTTAATGGC 3346917 Query 869356 CCAGTCGGCCTTTTT 869370 ||| |||||||| || Sbjct 3346916 CCAATCGGCCTTCTT 3346902 >seq3 Length=5003481 Score = 122 bits (134), Expect = 1e-21 Identities = 122/157 (78%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || ||||| || ||||| || | || || || ||| Sbjct 1409720 GACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGTCGGTCTGGGTGAG 1409661 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| |||||||||||||||||| ||||| |||||| Sbjct 1409660 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 1409601 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 1409600 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 1409564 >seq21 Length=969849 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||||||||||||| ||| ||| || || | || ||||| | || || ||| Sbjct 746052 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 745993 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || ||||||||||||||||| |||||| || ||| Sbjct 745992 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 745938 >seq4 Length=2618736 Score = 109 bits (120), Expect = 7e-18 Identities = 204/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| || || || |||||||| || || |||||||| Sbjct 314637 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 314696 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||||| | | ||| | |||| | ||| | |||| || | || Sbjct 314697 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 314756 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | ||||||||| | ||||| || | ||||||||||| || || Sbjct 314757 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 314816 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| ||||| || | || || || | || || Sbjct 314817 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACC 314876 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || || | || ||||| ||| | | ||||| || |||||| Sbjct 314877 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 314936 >seq13 Length=1131578 Score = 89.7 bits (98), Expect = 6e-12 Identities = 139/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 1726961 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 1727020 ||| | || | |||||||||| || ||| ||||||||||| || || ||||| ||||| Sbjct 173822 GACTCATCAATGTCGGGGTCGTTGATCAGACCCTTCCACCCCACTGTGGTGCGGGGCTTC 173881 Query 1727021 TCGACATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCG 1727080 |||| ||||| ||||| | || || || ||||| || | ||||||| | || Sbjct 173882 TCGAGGTAGGCACGCATAATAACACAGAGGTCGTCG--GAAAGCTTCTCGGAGA---GCT 173936 Query 1727081 C--GCAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAA 1727138 | ||| || || |||| |||| | | | || |||||||| ||| || ||||| | Sbjct 173937 CCTTCAGACGCTGGGCATATTCGAGGGCCGTGGCAGGGTCGTGGATCGAGCAAGGACCGA 173996 Query 1727139 CGATAACCAGCAGCCG 1727154 | | ||||||||| || Sbjct 173997 CAACAACCAGCAGACG 174012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107137312512291