Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq20 149 1e-29 seq4 107 3e-17 seq21 104 4e-16 >seq20 Length=3442689 Score = 149 bits (164), Expect = 1e-29 Identities = 183/250 (73%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| ||| | | Sbjct 3347412 TGACACCAGCCTTCTGGTAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCA 3347353 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 3347352 GCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 3347293 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| ||||| || || |||||||| ||||| || || ||||| Sbjct 3347292 GGGCCACCAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCA 3347233 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || |||||||| | || | | ||||| | ||| || ||||||||| Sbjct 3347232 TGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCT 3347173 Query 794131 CGATGATGAT 794140 ||| |||||| Sbjct 3347172 CGACGATGAT 3347163 Score = 102 bits (112), Expect = 1e-15 Identities = 139/192 (72%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| ||| ||| || |||||||| || ||||| Sbjct 3347090 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 3347031 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| | ||| || ||||| ||||| ||||| ||||| || || Sbjct 3347030 CTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGCAGCGAA 3346971 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||| |||| || || ||| | |||| | | ||||||||| || ||||| Sbjct 3346970 AGCAACGAGACGCTGAGCGAA--GGTCGACTCCCT-GTCCTGGATCCACTTAATGGCCCA 3346914 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 3346913 ATCGGCCTTCTT 3346902 >seq4 Length=2618736 Score = 107 bits (118), Expect = 3e-17 Identities = 172/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 2071766 AGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAA 2071825 |||||||||| || || | |||| | || || ||| || || ||| ||||| | Sbjct 314390 AGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGA 314449 Query 2071826 AGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGC 2071885 | || | |||||||||| | | | || || ||| ||||| || ||||||||| Sbjct 314450 ACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGG 314509 Query 2071886 CGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCC 2071945 | || || |||||||| || | | ||||||||| ||||||||||| ||||| || Sbjct 314510 CATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGA 314569 Query 2071946 AGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGC 2072005 | |||| || || | |||||| ||||| |||||| |||||| || || |||||| Sbjct 314570 ACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGT 314629 Query 2072006 CGCCGCC 2072012 ||| || Sbjct 314630 TGCCACC 314636 Score = 93.3 bits (102), Expect = 7e-13 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| ||| || || || |||||||| ||||| |||||||| Sbjct 314637 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 314696 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| | | ||| | || | | ||| | |||| || | || Sbjct 314697 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 314756 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||| | ||||||||| | ||||| | |||| || |||||||| || || Sbjct 314757 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 314816 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755 || ||| |||||||||| | || ||||| || Sbjct 314817 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGA 314852 >seq21 Length=969849 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| |||||||||||||| ||| || || || | || ||||| ||||| || ||| Sbjct 746052 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 745993 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 745992 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 745938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243953385097