Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30]
23 sequences; 35,738,354 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq4 98.7 8e-16
>seq4
Length=2618736
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | || ||| || || | ||||| |||||||| ||||||||||| || || |
Sbjct 1670644 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1670703
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || || || || ||||| | |||| | ||||| ||||| |||
Sbjct 1670704 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 1670763
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| ||||| || ||| || || || ||| | || | ||||||||| || ||
Sbjct 1670764 ATGCCCTCCTTGTCCTG-AATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 1670822
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774
||||| || || || || || || | ||| || ||
Sbjct 1670823 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1670858
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| ||||||||||| || ||||| || || | | ||| ||
Sbjct 1670427 ACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCC 1670486
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | || || ||||| | ||||| | ||||| ||||| || || || || ||
Sbjct 1670487 ATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTT 1670546
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || || || || | || | ||||| ||| ||| ||||| | || |
Sbjct 1670547 GTCTTG-AATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGA 1670605
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || | || || || || ||||||||
Sbjct 1670606 TCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 1670642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219092018243
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |