Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq20 176 4e-39 seq4 140 3e-28 seq14 125 7e-24 >seq20 Length=3442689 Score = 176 bits (194), Expect = 4e-39 Identities = 344/505 (68%), Gaps = 9/505 (2%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || || ||| ||| ||| || | Sbjct 3347399 CTGGTAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 3347340 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 3347339 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 3347280 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 |||||||| |||||||| ||||||| ||||| || | |||||||||||||| || Sbjct 3347279 GCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGC 3347220 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| || || | ||||||| ||||||| | || ||||| || ||| | Sbjct 3347219 AACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTC 3347160 Query 120591 --GAGCATAGTG-TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || || | || ||| |||| | | || | | | | |||||| || Sbjct 3347159 TTCAACAACCTGTTTGCTGGGGCGGTTGT-TCAGGTGGGAGAACAG-----CAGGCAAGC 3347106 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| |||||||| |||||||| || || || ||||||||| || || || || || Sbjct 3347105 GAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGG 3347046 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| || | |||||| |||| |||| || ||| || || ||||| | || Sbjct 3347045 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACC 3346986 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||| ||| || || || || | |||| || || |||| | | || | |||||| Sbjct 3346985 CTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTGGATCCA 3346926 Query 120828 CTTCATGGCCCACTCGGCCTTTTTG 120852 ||| |||||||| |||||||| ||| Sbjct 3346925 CTTAATGGCCCAATCGGCCTTCTTG 3346901 >seq4 Length=2618736 Score = 140 bits (154), Expect = 3e-28 Identities = 592/922 (64%), Gaps = 26/922 (3%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTTT 148109 ||||| ||||||||||||||| |||||||| || ||||| | | || || |||| Sbjct 313329 GACTGAGACTGGTCAATGAACGCACCACGGTCCGCTGCCATCTGCAGGATCGTCCGCT-- 313386 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 |||||||| |||||||||||||| |||||| | | ||| ||| | |||| Sbjct 313387 -GGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGATGTCACTGGGGATGTTGGGGATG 313445 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| || || || | | |||| || | || ||| | ||||| | ||| | Sbjct 313446 TTCTGGACGGAACCACCCTCGGCAATGATGCGGTTCTTCATGTTGTCCGACCACAGGCCG 313505 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 || |||| |||||| | | ||| | | || |||||||| ||||| || || | || Sbjct 313506 AGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACCACCTGGAACTCACCAGCCAAGACA 313565 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || || || | |||| || | || || || |||||||| |||||| ||||| Sbjct 313566 CGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGA 313625 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 ||| | || ||||||||| || ||||||| |||||| | ||| | Sbjct 313626 CTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCG 313685 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || ||| ||| ||||| |||||||||||||| | || || || |||||||||| Sbjct 313686 ATCTTGGCCTTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCG 313745 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||| || || || || | || |||||||| | ||| | |||| | || Sbjct 313746 TACTGAAGGATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCC 313805 Query 148530 GCCGCCAGTTCGCAGCTCGC-CTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 || || ||| | || || | | | ||| || || |||||| || || | Sbjct 313806 TTGGCGAGATCGGACGAGGCGGTCAAAC-CAGCGTGATAGATGGTCTCGAAGATCTGGAT 313864 Query 148589 GTTGAGCAG---CGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTC 148645 ||| ||| | ||| | | | | ||| | |||| || || | || || || Sbjct 313865 GTTCAGCTGTCTGGCCTCGGCCGAG---TCGAAGGGCAGGCGGAGAGCGAGGAAAGCATC 313921 Query 148646 GGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCT 148705 || || || | || |||| ||||||| ||||| | |||||| || Sbjct 313922 AGCCAGACCGTTGACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGCCTC 313981 Query 148706 CTCGAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG 148764 | || || |||| |||| ||||||||||||| ||||| || || |||| |||| Sbjct 313982 CGGGACGGGGTAGTAGTTGATGTCGATGATCTTGTTCAAG-TTACGGACCAAGACCTGGA 314040 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCG------GT--T 148816 | | | ||| |||| || |||| | | | | | |||||| || Sbjct 314041 CGACCTCGTGGAGCTTGCCAAAGTCATACTCG-CCGCGA-GCAGCATCGACGAAAGTAGG 314098 Query 148817 CACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGAT 148876 | ||| | |||||| || ||||| || || ||||||||| || |||||||| | ||| Sbjct 314099 AAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGAT 314158 Query 148877 CTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTT 148936 ||| | ||| || ||| || ||| || | |||||| || |||||||| |||| Sbjct 314159 CTCAGTGCAGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTT 314218 Query 148937 GCACGCGTCCTTGTACAGCATG 148958 ||| || ||||||||||||||| Sbjct 314219 GCAAGCATCCTTGTACAGCATG 314240 Score = 109 bits (120), Expect = 5e-19 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | | |||| | | | ||||| |||||||| || Sbjct 1670975 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCA-TCCTCCAGCTGCTTTCC 1671033 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||||||||||||||| ||||| || |||||| ||| Sbjct 1671034 GGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTT 1671093 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || ||| ||| ||| || |||| ||||| || |||||||| Sbjct 1671094 GACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATTGTCTTGCCGGT 1671147 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| || ||||| ||| || || | | | ||||| | |||||| || Sbjct 1670446 GTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCCAACTGCTTACC 1670504 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || ||||||||||||||||| ||||| ||| Sbjct 1670505 AGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTT 1670564 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||||| | || || || | |||| || || || || ||||| Sbjct 1670565 AACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGT 1670624 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1670625 CTTGACGAAGATCTGCAT 1670642 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||||||| | ||| | | | || || | |||||| || ||| Sbjct 1670223 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCA-TCTTCCAACTGCTTACCAGCGA 1670281 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | ||||| ||||||||||| || || ||||| ||||| || ||||| ||||| | Sbjct 1670282 AGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGT 1670341 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| || || | | |||||| || | || | || |||||||| ||||| || | Sbjct 1670342 TATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCA 1670401 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 1670402 CGAAGATCTGCAT 1670414 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || || ||||||||||| || || ||||| |||||| Sbjct 1670716 TCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 1670775 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | || | ||||| | | |||||| || | ||||| | Sbjct 1670776 TCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATG 1670835 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || || |||||||| || || |||| Sbjct 1670836 GTCTTTCCGGTCAGGGTCTTGACGA 1670860 >seq14 Length=2507526 Score = 125 bits (138), Expect = 7e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||||| ||| |||| || |||| || |||||||||||||||||| ||| ||| Sbjct 853315 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 853256 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 ||||||||| |||| || |||||| || ||| | | || || ||||||||||||||| Sbjct 853255 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGCGTCACGTCGGTGAC 853196 Query 116596 CTGGGCAAC 116604 || |||||| Sbjct 853195 CTTGGCAAC 853187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420661016520