Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq20 82.4 7e-11 >seq20 Length=3442689 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| || ||| | |||| ||||||||| || ||||||||||| Sbjct 3346678 GCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGG 3346619 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| | || || | ||||||||| |||| |||||| | || |||||||||| Sbjct 3346618 AGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGACA 3346559 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 || || || ||| | ||||| | | | | |||||||||||| |||| |||| Sbjct 3346558 GATCAATTTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCC--AGAT 3346501 Query 110892 CT 110893 || Sbjct 3346500 CT 3346499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094272035360