Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq20 174 2e-37 seq4 109 8e-18 seq6 87.8 3e-11 >seq20 Length=3442689 Score = 174 bits (192), Expect = 2e-37 Identities = 221/299 (74%), Gaps = 5/299 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || |||||||||||||| | || | Sbjct 3346500 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATC 3346558 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | ||||| ||| ||| ||||||||||||| | |||||| Sbjct 3346559 TGTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCT 3346618 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| || || ||| ||| ||||||||| || ||||||||| | || Sbjct 3346619 CCCACGTTCTCGCGTTCTT-CGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAG 3346677 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | |||||||| | || ||||| |||| || ||||| ||||||||| Sbjct 3346678 CGCTTCAGCGGCGAGGTCCAGGTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATG 3346737 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||||||||| || |||||||| |||||||| || |||||| ||||||| || Sbjct 3346738 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATTGATACCTACATCAAGGAGCC 3346796 Score = 150 bits (166), Expect = 3e-30 Identities = 192/259 (74%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||||||||||||||||| || ||| | ||||| | | || | ||||| || || Sbjct 3347163 ATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCT 3347222 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| ||| ||||| |||||||| || ||| ||||| ||||||| Sbjct 3347223 CTGCTGGGCATGAACTCCAA-GCTGATGTGTCAGTACATCGAGTTT-GTCGCGGACCGCC 3347280 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||||| ||| | ||| Sbjct 3347281 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATG 3347339 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||||||| | ||| ||||||||||| |||||| || || || || ||| Sbjct 3347340 GAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAG 3347399 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 3347400 AAGGCTGGTGTCATGGCCA 3347418 Score = 102 bits (112), Expect = 1e-15 Identities = 141/191 (74%), Gaps = 10/191 (5%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || |||||||| ||||| || ||||||||| | | |||| ||||| ||| || ||| Sbjct 3346902 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGAC-AGGGAGTCGAC-CTTCGCTCAGC 3346959 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGC---CA 1456238 | ||||| | || || || || ||||| ||||| ||||| || || || ||| || Sbjct 3346960 GTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGG---TTCCTTCGCTTCCA 3347016 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298 |||| |||||||||||||| || |||||||| |||| || ||| |||||| | ||| Sbjct 3347017 TCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTC-TCACCTTCTCCAACGAGCTCATC 3347075 Query 1456299 AGTCGCGACGA 1456309 ||| ||||| Sbjct 3347076 TCTCGTGACGA 3347086 >seq4 Length=2618736 Score = 109 bits (120), Expect = 8e-18 Identities = 199/289 (69%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 259895 ATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953 ||||| ||| ||| ||||| ||| || | || || || || || || || || || | Sbjct 314924 ATGTCCCAGAAGTACTTCAC-TCACGCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCA 314866 Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013 || ||| | | || ||||| || | |||||||||| || || || || ||||| Sbjct 314865 GCCTCAGCTTGCCTCTTGCTTCCTCGTCGACATGAAGGAGGACAGCATTGACGGTATCTA 314806 Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073 ||||| | ||| ||||| | ||||||||| | ||||| || || ||| | || Sbjct 314805 CGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGGTGGTATTGGTCTGAACGT 314746 Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133 ||| | ||| | | || | ||| | | ||||||||||| |||||||| || Sbjct 314745 GCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGTACCTCCAACGGTCT 314686 Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 ||| ||||||||||| ||||| ||| |||| || | ||||| |||||| Sbjct 314685 TGTTCCCATGCTTCGGGTTTTCAACAACACTGCCAGATACGTTGACCAG 314637 >seq6 Length=3823878 Score = 87.8 bits (96), Expect = 3e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 |||||||| ||||| |||||||||||| |||||| ||||| ||| |||| |||| ||| Sbjct 2172613 GGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGTTGGCCTCGGGTCTG 2172672 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGC 165863 | | ||| |||| ||||| ||| | ||||||||| Sbjct 2172673 TCCTTCCCCGTTGGTTTCAAGAACGGTACCGACGGC 2172708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808981607726