Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4 111 1e-19 seq6 87.8 2e-12 >seq4 Length=2618736 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| |||| |||||| || | || |||| ||||||||| || || Sbjct 1670452 TCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAG 1670511 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||||| || | || |||||||| ||||| ||| | | Sbjct 1670512 ATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 1670571 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| ||||| || |||| |||||||| || ||||| | ||| || || Sbjct 1670572 TCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACG 1670631 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 1670632 AAGATCTGCAT 1670642 Score = 107 bits (118), Expect = 2e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| || | || ||| || | || ||||||||||| || || || Sbjct 1670680 TCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAG 1670739 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||||| |||| || |||||||||| ||||| ||||| | | Sbjct 1670740 ATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTG 1670799 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | ||||| || |||||||| | ||||| || || || |||| Sbjct 1670800 TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCA 1670848 Score = 105 bits (116), Expect = 6e-18 Identities = 164/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||| ||||| | | | ||||| || | || |||||||| || |||||||||||| Sbjct 1670185 TTTCCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCG 1670244 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | | || || | || |||| ||||||||| || || || | ||||||||||||| Sbjct 1670245 GAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGG 1670304 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGAT 35683 |||| || |||||| || ||||| ||| | | | | || || |||| Sbjct 1670305 GGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTC--- 1670361 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||||| ||| ||||| || || || | ||| ||||| || |||||||| Sbjct 1670362 TCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 1670414 >seq6 Length=3823878 Score = 87.8 bits (96), Expect = 2e-12 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || ||||||||||| || || | Sbjct 2954843 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 2954784 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 | | |||||||| |||| || | | |||||||||| |||||| ||| | |||| Sbjct 2954783 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 2954725 Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||||||||| || || || | || || || |||||||| Sbjct 2954724 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGT 2954678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793470396840