Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 113 5e-20 seq6 100 3e-16 >seq4 Length=2618736 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || |||||||| || || |||||||||||| Sbjct 1670416 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAC 1670475 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||| || || || || |||||||||||||| || || || Sbjct 1670476 AAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGG 1670535 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || |||||||| || || || || | ||||||||| ||||| || Sbjct 1670536 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACT 1670595 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || || || | ||| || ||||| || ||||| Sbjct 1670596 TCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 1670642 Score = 111 bits (122), Expect = 2e-19 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || |||||||||||||||||||||||||| | ||| | || || Sbjct 1670662 ACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCC 1670721 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| ||||||||| || || || ||||| || || || ||| Sbjct 1670722 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 1670781 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| || || ||||| || || || ||||| || Sbjct 1670782 ATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTT 1670841 Query 134685 CCGGTTAAAGTTTTAACGA 134703 ||||| | || || |||| Sbjct 1670842 CCGGTCAGGGTCTTGACGA 1670860 Score = 107 bits (118), Expect = 2e-18 Identities = 339/525 (65%), Gaps = 3/525 (1%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || ||| ||||| |||| || || || || || ||||| ||||| || ||| | Sbjct 314999 CAGCACCTGCTGATGCGTGTTGCCGTTGGTATCCACGGTAGTGACATCGAGAAGGCCATC 314940 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||||| ||||||| ||| | || || ||||| || || || |||| | Sbjct 314939 GAGACCTACCACTTGATGTCCCAGAAGTACTTCACTCACGCCTCCCCGACTCTGTTCAAC 314880 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || || || | |||||| | |||| || || | | |||| || |||||| Sbjct 314879 GCTGGTACTCCCCAGCCTCAGCTTGCCTCTTGCTTCCTCGTCGACATGAAGGAGGACAGC 314820 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 || ||||| || ||| |||| || |||||| | || ||||| || ||| || Sbjct 314819 ATTGACGGTATCTACGACACTTTGAAGACTTGCGCTATGATCTCCAAGACCGCCGGTGGT 314760 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || ||||||||||| || | | ||| | | ||| ||| | ||||||||| Sbjct 314759 ATTGGTCTGAACGTGCACCGCATCCGCTCTACCGGATCTTACATTGGTGGCACCAACGGT 314700 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 | ||| |||| | | |||||| | || || ||||| ||| | | || | || ||| Sbjct 314699 ACCTCCAACGGTCTTGTTCCCATGCTTCGGGTTTTCAACAACACTGCCAGATACGTTGAC 314640 Query 7924 CAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| || ||||| || || ||||||||| | ||||| |||||| |||| Sbjct 314639 CAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACTCGGAT 314580 Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040 | | || | || | || ||| ||| ||| || || || ||| |||||| Sbjct 314579 GTCTTCGAGTTCCTGGACCTCCGTAAGAACCACGGTAAGGAGGAGGTCAGAGCCCGCGAT 314520 Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTT 8085 || |||| | ||||| || |||||||| |||| ||| ||| Sbjct 314519 CTGTTCTATGCCCTGTGGACTCCGGATCTGTTCATGAAGCGTGTT 314475 Score = 82.4 bits (90), Expect = 8e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || ||||| || ||||||||||| | || ||| | || || Sbjct 1670963 ACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCC 1671022 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || |||| ||||||||| ||||| || ||||| || || || || Sbjct 1671023 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGG 1671082 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | || ||| || || || ||||| || || || || Sbjct 1671083 ATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATTGTCTTG 1671142 Query 134685 CCGGT 134689 ||||| Sbjct 1671143 CCGGT 1671147 >seq6 Length=3823878 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 134521 ATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAA 134580 || |||| || ||||||||||||| | |||| | || || ||||| || || || | Sbjct 2954846 ATACCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGA 2954787 Query 134581 AAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCG 134640 | || | |||||||||||| || || || || || || || || || || ||||| Sbjct 2954786 AGATAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGT 2954727 Query 134641 CGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAA 134700 ||| | |||||| ||| || |||||||| |||||||| ||||| || | || || | Sbjct 2954726 TGTCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGA 2954667 Query 134701 CGAAA 134705 ||||| Sbjct 2954666 CGAAA 2954662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398254697960