Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30]
23 sequences; 35,738,354 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq20 134 2e-26
seq4 129 7e-25
seq14 82.4 9e-11
>seq20
Length=3442689
Score = 134 bits (148), Expect = 2e-26
Identities = 344/519 (66%), Gaps = 20/519 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || |||||||||||||||||||| ||||| || ||| ||| ||||||
Sbjct 3347395 TAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATG 3347336
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841
|| || || ||||| | | ||| | ||| || | | | | | ||
Sbjct 3347335 AAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 3347282
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
|| || |||| ||| |||| ||||||| | ||||| || ||||||||| || | ||
Sbjct 3347281 AGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGCAGA 3347222
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
| || || ||||| | |||| ||| ||||||| | || || || | ||||
Sbjct 3347221 GCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATG 3347162
Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018
| | || || ||| || | ||| || ||| || || | ||
Sbjct 3347161 TCTTCAACAACCTGTTTGCTGGGGCGGTTGTTCAGGTGGGAGAACAG---CAGGCAAGCG 3347105
Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078
|| || ||| |||||||||||||| |||||||| || || |||||| ||||| |||
Sbjct 3347104 AAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGC 3347045
Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138
|||||||| |||||||| | |||||| || | | || || || ||||||||||| |||
Sbjct 3347044 ATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCC 3346985
Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCA 130197
|| || ||||| |||| |||||||| ||| |||| || | ||| | | |||
Sbjct 3346984 TCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCA 3346926
Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236
||| || ||||| | ||||| || | || || |||||
Sbjct 3346925 CTTAATGGCCCAATCGGCCTTCTTGGCAATGCAGGGGAC 3346887
>seq4
Length=2618736
Score = 129 bits (142), Expect = 7e-25
Identities = 367/561 (65%), Gaps = 5/561 (1%)
Strand=Plus/Plus
Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997
||||| ||||||||| || ||||| ||||| | | || | | || || || |
Sbjct 314380 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 314439
Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057
| |||||||| |||| ||| | || | ||||||| ||||||||||| || || ||
Sbjct 314440 TTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGA 314499
Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117
|||| || || |||| ||||| || | | || || | || || || |||
Sbjct 314500 GTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 314559
Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177
| |||| || || | || ||||| |||||| || || ||||| | || | | ||
Sbjct 314560 AGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCG 314619
Query 119178 TTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234
||| ||| |||||| || || || |||||| ||| || || ||||||||
Sbjct 314620 GGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATG 314679
Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACA 119294
|||| | ||| | ||| || || || || | ||| ||| | | | ||
Sbjct 314680 GGAACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATG 314739
Query 119295 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354
||| | || || ||||||||| || || ||| ||||| ||||| | | | |
Sbjct 314740 CGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAA 314799
Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414
|| ||||||| || || || ||| |||| | ||| ||||||||| | |
Sbjct 314800 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 314859
Query 119415 TGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TG 119473
|||||| ||| |||||||||||||| ||||| || | ||||| |||| ||| | ||
Sbjct 314860 TGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTG 314918
Query 119474 GGACATCTTGTCGTAGGTCTC 119494
||||||| || |||||||||
Sbjct 314919 GGACATCAAGTGGTAGGTCTC 314939
Score = 111 bits (122), Expect = 2e-19
Identities = 459/719 (64%), Gaps = 14/719 (2%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| |||| ||||| ||||| |||||||| ||| |||||||| || || |
Sbjct 313575 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 313634
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| ||||||||||| || | || | |||||| |||| ||| | | || ||
Sbjct 313635 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 313694
Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361
|||||||| ||||||| || | | | | | |||||| || |||| |||
Sbjct 313695 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 313754
Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421
||||| ||||| | || |||||||| | ||||| || | || ||| || |
Sbjct 313755 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 313814
Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGC 118480
||||| || | | |||||||| || || || || || | |||| ||
Sbjct 313815 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 313874
Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540
|| ||||||| | || || || | || ||| | || |||| || ||||| |
Sbjct 313875 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 313933
Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGG 118597
|||||| || |||| || || || | | || |||||| || |||| |||||
Sbjct 313934 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 313990
Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657
|| | || | ||||| | | | || | || | | |||| || || ||
Sbjct 313991 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 314050
Query 118658 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714
||||| | | ||| | | ||||| | ||| ||| | |||||||||| |
Sbjct 314051 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 314107
Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774
|| || || || || |||| ||||||| | || ||||||| || || || |||||
Sbjct 314108 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 314167
Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834
| ||| || || ||||| || | |||||| || || ||| |||| || |||||
Sbjct 314168 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 314227
Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893
|||||| |||||| | || | || ||||| || || | || |||||||| | |||||
Sbjct 314228 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGA 314286
>seq14
Length=2507526
Score = 82.4 bits (90), Expect = 9e-11
Identities = 165/239 (69%), Gaps = 12/239 (5%)
Strand=Plus/Plus
Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG--TTGATTTTCACGGGCAA 14291
||||||| || ||||||||||||||||| | || || || | ||||| | || |
Sbjct 1556363 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 1556419
Query 14292 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 14349
|| | || | ||| || |||| | ||||||||| ||||||||||| ||||| |
Sbjct 1556420 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 1556478
Query 14350 GG--CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGG 14407
| | | | ||| | || |||||| ||| |||||||| || |||| ||| ||
Sbjct 1556479 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 1556536
Query 14408 AGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
| ||||| || || || || || | |||| ||||||||| ||||| |||||||
Sbjct 1556537 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 1556595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435022199880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |