Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq14 199 1e-45 seq12 143 8e-29 seq4 141 3e-28 seq6 91.5 4e-13 >seq14 Length=2507526 Score = 199 bits (220), Expect = 1e-45 Identities = 591/906 (65%), Gaps = 13/906 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || |||||||| || || || || || ||||| | ||| | | |||| | Sbjct 2352529 CCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 2352588 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| || || | Sbjct 2352589 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACTACCCCCTCTTTCGTGGCTTTCA 2352648 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 2352649 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACA 2352708 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||||||||| || || ||| | ||||| | ||| | || Sbjct 2352709 ACACCGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTC---- 2352764 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || || || | || || | || || | ||||| | | ||| |||| || || || Sbjct 2352765 CAGTCCGACATGAAGCACTGGCCCTTCAAGGTTGT-CGAGAAG--GGTGGCAAGCCCATC 2352821 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 | |||||||| | || || || || || || ||||| || | || || ||| Sbjct 2352822 GTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGGTCTCCTCCATG 2352881 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || ||| || | ||||| || || | |||| || || | | ||| Sbjct 2352882 ATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGCACCGTCAACAACGCT 2352941 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 2352942 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGT 2353001 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || || || || ||||| ||||| || ||||| Sbjct 2353002 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCC 2353061 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || | || || || ||| | |||||| Sbjct 2353062 TACGGTCTGGACAAGAAGGCCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 2353121 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || | || ||||| || || || || || || || Sbjct 2353122 GGTACCTTCGATGTCTCCCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACC 2353181 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | ||||| || || || || || || ||||| || || || Sbjct 2353182 GCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTC 2353241 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | || | || || | || | ||||| Sbjct 2353242 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCTCACCTCCAACGCTCGTGCTCTCCGTCG 2353300 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || ||||| |||||| || | || || || |||| ||||| || Sbjct 2353301 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCCAT 2353360 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| || || ||||| || || | || |||| | || || || |||||||| || Sbjct 2353361 TGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTT 2353420 Query 350092 TGAAGA 350097 || || Sbjct 2353421 CGAGGA 2353426 >seq12 Length=2477397 Score = 143 bits (158), Expect = 8e-29 Identities = 336/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || || ||||| || || |||||| || || || |||||| Sbjct 32043 GCAGTCATCACCGTGCCCGCTTATTTCAACGACAACCAGCGCCAGGCTACTAAGGATGCT 32102 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || |||||||| ||||||||| Sbjct 32103 GGTGCCATTGCTGGTCTCAACGTGCTCCGTATCATCAACGAGCCCACTGCAGCAGCAATT 32162 Query 349730 GCATATGGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| |||| | | ||| | || || ||||||| | ||| | Sbjct 32163 GCTTATGGCCTTGGCTCCGGCAAGTCTGATAAGGAGCGTAACGTTCTTATCTACGATCTT 32222 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | ||| || | || ||||| Sbjct 32223 GGTGGTGGTACTTTCGATGTGTCTCTCCTTAACA-TCCAAGGTGGTGTCTTCACTGTTAA 32281 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||| || ||||| || ||||||||| |||| ||||||| ||| | || Sbjct 32282 GGCTACTGCCGGAGATACCCACCTTGGTGGACAAGACTTTGATACCAACCTCCTGGACCA 32341 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAG 349961 || || || || |||| |||| || | || | |||||| | |||| Sbjct 32342 CTTCAAGAAGGAGTTCCAGCG-CAAGACTGGCAAGGACCTCTCTGGAGACG---CGAGAG 32397 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | | |||||||| ||||| || || || |||||||||||| | || || |||||| Sbjct 32398 CCCTCCGTCGCCTCAGAACCGCTTGCGAGCGTGCTAAGCGTACTTTGTCCAACGCTACCC 32457 Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACA 350080 | || || | ||||| || ||| ||| | |||||| | || ||| ||| || || || Sbjct 32458 AGACTACTGTGGAAATCGACTCT-TTGTTCGATGGCGAGGACTTCAATTCCTCCATCACC 32516 Query 350081 CGTGCTCGGTTTGAAGA 350097 |||||||| |||||||| Sbjct 32517 CGTGCTCGCTTTGAAGA 32533 >seq4 Length=2618736 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| || ||||| || || || || || Sbjct 1670412 CATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 1670471 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || | || || ||||| ||||| | ||| ||||| || || Sbjct 1670472 GGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGG 1670531 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || ||||| || | || || |||||||| | || || | ||| Sbjct 1670532 GGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTC 1670591 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| | ||| | |||||||| || || || || || || |||||||| Sbjct 1670592 AACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 1670642 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || || || |||||||| || || || Sbjct 1670640 CATACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTC 1670699 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || |||||||| ||||| ||||| ||||| || || Sbjct 1670700 AGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGG 1670759 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || ||||| || || | ||||| | || Sbjct 1670760 GGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTC 1670819 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || ||||| || | ||||||||||| || || || || Sbjct 1670820 CACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1670858 Score = 116 bits (128), Expect = 1e-20 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| ||||||||||| || || || || || || Sbjct 1670941 CATACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 1671000 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || ||||| || || || ||||| || ||||| ||||| ||||| || || Sbjct 1671001 ACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGG 1671060 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || |||||||| || || | || || || || || | ||| | ||| | Sbjct 1671061 AGGGATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATC-GCTGGACT 1671119 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || | |||||| ||||| Sbjct 1671120 CGACCTCGAGGGTGATTGTCTTGCCGGT 1671147 >seq6 Length=3823878 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 |||||||||||||||||||| || || || | || || | ||||||||||| ||||| Sbjct 614651 ACACCAGCAAAGTGGAAAGTGTTGAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGA 614710 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || |||| || ||||||||||| ||||| ||| || ||||| Sbjct 614711 GCAGCAAGCACACCAACCATTTCACCAGGGTTGGCACCAGCCT 614753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253953473469