Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4 109 5e-19 >seq4 Length=2618736 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | || || | ||||| ||| | ||| Sbjct 1670642 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 1670583 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || ||||||||||| |||||||| || || || || Sbjct 1670582 GACACAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAG 1670523 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | ||| || || || ||||| || | ||| | ||||| |||||| Sbjct 1670522 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAAC 1670463 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | || | || | ||| | || ||||| || Sbjct 1670462 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGGTAT 1670413 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||||||| | ||||| || || ||||| || Sbjct 1670414 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 1670355 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| || |||||||| || || ||||| || || || || Sbjct 1670354 GATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCAG 1670295 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || |||||||| | || | |||||||||||| Sbjct 1670294 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAAC 1670235 Query 27168 ATTCAAAAGGAG 27179 || || |||||| Sbjct 1670234 ATCCAGAAGGAG 1670223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || |||||||| ||| | || || ||||| ||||| | || ||| | || || Sbjct 1670858 GTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAC 1670799 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | || || || ||||| ||||| || ||||| || || || || |||||| | || Sbjct 1670798 AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATC 1670739 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||| || || || |||| || | ||| | || || ||||||||||||||||| Sbjct 1670738 TTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAA 1670679 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||| | || | || | ||| |||| ||||| || Sbjct 1670678 TCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGGTAT 1670641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918274960960