Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq93 131 1e-25 seq520 100 3e-16 seq67 82.4 7e-11 >seq93 Length=37945 Score = 131 bits (144), Expect = 1e-25 Identities = 330/497 (66%), Gaps = 20/497 (4%) Strand=Plus/Minus Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019 || |||| | || | || | || || ||||| || || ||||| ||||| || || | Sbjct 18044 ACCTTCGGCCAGCGTCTTGTGGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCC 17985 Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079 || || | || || ||| ||||||| || ||| |||||||||| || || || |||| Sbjct 17984 TTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACCTTCTCCAAC 17925 Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 ||| | || || || || ||||||||||| ||||| ||||| || || | | ||| ||| Sbjct 17924 GAGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGTCTCCTCTTCTCGCAC 17865 Query 58140 ATTGTCAATAAACCGACGCGGGATCGCATCTT-----GGACATTATCACCGAGGCGGTCG 58194 | | ||||| | | | | || || |||| ||||| || || |||| Sbjct 17864 CT----GAACAACCG-CCCCGACCCCCAGGTTGTGGAGGACGTTATCGTGGAAGCTGTCG 17810 Query 58195 CGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATG 58254 | || || || ||||| | || || || || || || | || ||||||||| Sbjct 17809 CCATTGAGAAGGAGTTCTTGACTGATGCTCTCCCTTGCGCTCTTCTTGGTATGAACTCCA 17750 Query 58255 ATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGG-- 58312 | |||||| ||||||||||||| || |||||| | || ||| ||| | |||| Sbjct 17749 ACCTGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCTTGGTCGCCC---TTGGCA 17693 Query 58313 ---AGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGA 58369 ||| || | | |||| | | || || ||||| || ||| || ||||| |||| Sbjct 17692 ACAAGA-AGT-ACTTCAACGCCACCAACCCCTTTGACTTCATGGATAACATCTCCCTCGC 17635 Query 58370 GGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAG 58429 || ||||| ||||| ||||| || ||| | || || || || || |||||| Sbjct 17634 CGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCTGGTGTGATGGC 17575 Query 58430 CGGTAACAAGTTGGAGG 58446 | | | |||| ||||| Sbjct 17574 CAGCACCAAGAAGGAGG 17558 >seq520 Length=19029 Score = 100 bits (110), Expect = 3e-16 Identities = 147/205 (72%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| |||||||| ||||| || || |||||| | || || || || ||| | ||| Sbjct 11195 TCGTGAAGACTCTCACAGGAAAGACTATCACCCTTGAGGTCGAGTCGAGCGATACCATCG 11254 Query 31263 AAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 | | ||||| ||| || | | ||||||||||||| | || ||||||||||| ||| Sbjct 11255 ACAACGTCAA---GAGCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAACGTT 11311 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || |||||||| || || |||| ||| ||| || ||| || || ||||| | Sbjct 11312 TGATCTTCGCTGGTAAGCAACTGGAGGACGGCCGCACTCTGTCCGACTACAATATTCAGA 11371 Query 31380 AAGAATCGACTCTTCATCTGGTACT 31404 | ||||| |||||||| |||| || Sbjct 11372 AGGAATCCACTCTTCACTTGGTTCT 11396 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || ||||| | || |||||| | ||| Sbjct 11413 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACAATCACACTGGAGGTTGAATCATCC 11472 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | | | ||||| || | || || ||||| Sbjct 11473 GACACAATCGACAATGTGAAGTCAAAGATTCAAG-ATAAGGAGGGAATCCCCCCTGACCA 11531 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || ||||| ||||| ||| | ||||| Sbjct 11532 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAAGA 11567 >seq67 Length=42833 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || || || || || ||| |||||||||| || ||||| | Sbjct 24784 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 24843 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || ||||||||||||||||| Sbjct 24844 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 24903 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||| || || ||| | || || || ||||||| || ||||| || || Sbjct 24904 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 24963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445742947115280