Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1703 140 2e-28 seq520 95.1 8e-15 >seq1703 Length=6567 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5517 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5458 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5457 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5423 >seq520 Length=19029 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| |||| ||||| ||||||||| ||||| ||||||||||| || | Sbjct 11413 TACCACCACGCAAGCGCAGAACCAAGTGAAGAGTGGATTCCTTCTGAATATTGTAGTCGG 11354 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | || |||| || | ||| || || || || || | ||||| || |||| | Sbjct 11353 ACAGAGTGCGGCCGTCCTCCAGTTGCTTACCAGCGAAGATCAAACGTTGCTGGTCGGGAG 11294 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTC 38266 | | |||||| |||||| || || ||| || || | || |||| ||| || || Sbjct 11293 GAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTATCGCTCGAC--TC 11236 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATAT 38311 || || | || ||||| || || || | || ||||||| ||| Sbjct 11235 GACCTCAAGGGTGATAGTCTTTCCTGTGAGAGTCTTCACGACTAT 11191 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 ||| ||||| | | ||||| |||| ||| | ||||||||||| || || ||||| || Sbjct 11871 ATTTCCACCACGGAGACGCAGGACCAGATGTAAGGTGCTCTCCTTCTGGATGTTGTAGTC 11812 Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 || | ||| | || |||| || || || ||||| || || ||||| || || | Sbjct 11811 GGAGAGCGTGCGTCCATCCTCTAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCCGG 11752 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 ||||| || || ||||| ||| || ||| || || | || ||| || || || Sbjct 11751 GGGGATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTATCGATAGTGTCCGAGCTCTC 11692 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| || || || || || || || | || || || || |||||||| Sbjct 11691 AACTTCCAAAGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 11641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334930018150679