Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq520 86.0 5e-12 >seq520 Length=19029 Score = 86.0 bits (94), Expect = 5e-12 Identities = 163/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| | ||||| ||| || Sbjct 11641 ATGCAGATCTTTGTCAAGACACTCACTGGCAAGACCATCACTTTGGAAGTTGAGAGCTCG 11700 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| | || | ||| | || | ||| ||||| || || || || || |||| Sbjct 11701 GACACTATCGA-TAACGTCAAGTCCAAGATTCA-AGACAAGGAGGGTATCCCCCCGGACC 11758 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || || |||| ||||| || || || |||| |||| ||||| | ||| |||| Sbjct 11759 AGCAACGTCTTATCTTTGCTGGTAAGCAGCTAGAGGATGGACGCACGCTCTCCGACTACA 11818 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 | || || || || ||| ||||| | || || | || | || |||||||| Sbjct 11819 ACATCCAGAAGGAGAGCACCTTACATCTGGTCCTGCGTCTCCGTGGTGGAAATTA 11873 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 25005 ATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACT 25064 ||| | || |||||| | || || || | ||||| | || || |||||| || || Sbjct 11191 ATAGTCGTGAAGACTCTCACAGGAAAGACTATCACCCTTGAGGTCGAGTCGAGCGATACC 11250 Query 25065 ATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 ||||| | ||| || ||| ||||| ||||| ||||| || ||||| || || Sbjct 11251 ATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAACGT 11310 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || || || || || ||| | || || | |||||| || ||| ||||||||||| Sbjct 11311 TTGATCTTCGCTGGTAAGCAACTGGAGGACGGCCGCACTCTGTCCGACTACAATATTCAG 11370 Query 25185 AAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| || || || || || Sbjct 11371 AAGGAATCCACTCTTCACTTGGTTCT 11396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433305771492335