Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq268 132 5e-26 >seq268 Length=25617 Score = 132 bits (146), Expect = 5e-26 Identities = 409/626 (65%), Gaps = 10/626 (2%) Strand=Plus/Plus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 ||| ||||| || ||||| |||| | || ||||| || |||||||| | | | Sbjct 8622 CTCGAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGT 8681 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA-A 48243 ||| || | | | |||| |||| || | || || |||| ||||| ||| | Sbjct 8682 CCACTCGCCGTTGGCCTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGAGC-ATAGA 8740 Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303 | | ||| | || ||| | ||| || || || ||| | || ||||| || || | Sbjct 8741 AGAGATCACGAGCTCTCACTTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGGAATTCGA 8800 Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363 | ||| || ||||| ||||| ||||| || || | ||||||| || || || |||| Sbjct 8801 AAACATCGGCGTGCCAAGGTTCCAAATAGATGGCAAAAGCACCTGGACGCTTGTTTCCTC 8860 Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423 | || || | |||||||||||| ||||| | |||| | ||| || ||||||||||| | Sbjct 8861 CCTGGTCAACATATCTGGCAGTGTTGTTGAACACTCGAAGCATAGGAACAATACCATTGG 8920 Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAAT 48481 | ||| ||||| || ||| ||| || |||| | || | | ||| | Sbjct 8921 AGGAACCGTTGGTACCACCAATGTAAGAGCCGGTAGCACGAATGCGGTGCACATT--CAG 8978 Query 48482 ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCC 48541 || || ||||| || | ||||| || | ||||| || || || |||||||| || Sbjct 8979 GCCAATTCCACCAGCGGTCTTAGAGATCAATGCACAAGTCTTGAGCGTGTCATAAATACC 9038 Query 48542 TTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGT 48601 ||| || ||||| || |||||| | || || || || | || || ||| || Sbjct 9039 TTCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGT 9098 Query 48602 TCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATA 48661 || | ||| || || || ||||||||||| | || | |||| || | ||| ||||| Sbjct 9099 ACCGGCATTGAACAAAGTCGGAGATGCATGGGTGAAATACTTCTGAGACATCAAGTTATA 9158 Query 48662 TGTTTCAATAACAGAATCTATATCCCATT--GATGTATACCTATAGATACACGCATTAAC 48719 || || ||| | ||| || |||| || ||||| | || |||||||| || Sbjct 9159 GGTCTCGATAGC--CTTCTCAATGTCATTACCGTGAATACCAACAGCGACACGCATCAAA 9216 Query 48720 ATATATTGAGGTCTTTCAACAATTTT 48745 | | ||||| | |||| ||| ||| Sbjct 9217 AGGTGCTGAGGGCGTTCAGCAACTTT 9242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562079226050760