Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1302 131 2e-24 seq1459 113 6e-19 seq93 104 3e-16 >seq1302 Length=9094 Score = 131 bits (144), Expect = 2e-24 Identities = 125/158 (79%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||| ||||| ||||||||| ||||||||||| | ||| ||||||||| Sbjct 945 GACAGCATCGGCGGTACGGTAACGTGCGTGATCCGCAACGTGCCCGTAGGACTCGGCGAG 886 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || || || |||||| |||| ||| ||| || ||||||||||| ||||| || || Sbjct 885 CCCTGTTTCGACAAGCTCGAAGCCAAGCTTGCGCACGCCATGCTCAGCATCCCCGCAACA 826 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTT--GCGGGTGCG 19202 ||||| ||||| || ||| |||| || |||| |||| Sbjct 825 AAGGGCTTCGAAATCGGC-TCGGGCTTCGGCGGCTGCG 789 >seq1459 Length=8032 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| ||||||||| ||||||||| | || |||||| | || || || Sbjct 6632 GCCGCCAACTACCTTGACATCAAGGGACTGCTCGATGTCGGCTGCAAGACCGTTGCGAAT 6691 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || |||||||| || ||||| || || ||| || ||| Sbjct 6692 ATGATCAAGGGCAAGTCTCCTGAGGAGATTCGAAAGACTTTCAATATCCAGAACG 6746 >seq93 Length=37945 Score = 104 bits (114), Expect = 3e-16 Identities = 172/243 (71%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| || |||| ||||| Sbjct 17587 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCGGCGAGGGAGATG 17646 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 ||||| | || ||||||| | ||| ||| ||| | | || | ||||| Sbjct 17647 TTATCCATGAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCCAAGGGCGAC- 17705 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC-- 868866 | || || ||||||||||| ||||| |||||||||||||| ||| || |||||| || Sbjct 17706 CAAG-AGACGGTCGGCGACGAACTCAATGTACTGGCACATCAGGTTGGAGTTCATACCAA 17764 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 || |||||| | || || | || ||| ||||| ||||| || |||| || || || Sbjct 17765 GAAGAGCGCAA--GGGAGAGCATCAGTCAAGAACTCCTTCTCAATGGCGACAGCTTCCAC 17822 Query 868927 GAT 868929 ||| Sbjct 17823 GAT 17825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106793789749253