Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq268 114 3e-20 seq93 86.0 1e-11 >seq268 Length=25617 Score = 114 bits (126), Expect = 3e-20 Identities = 438/687 (64%), Gaps = 3/687 (0%) Strand=Plus/Minus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 ||| ||| || ||||| |||||||| || | || || || || || |||| | | Sbjct 9295 ACTTTTTCGGCTTCAAGACTCTTGAGCGGTCATACTTGCTGCGGATCGATGGAAAAGTTG 9236 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 |||||| ||||| ||| | || | ||||| || |||||||||| || |||| ||| Sbjct 9235 CTGAACGCCCTCAGCACCTTTTGATGCGTGTCGCTGTTGGTATTCACGGTAATGACATTG 9176 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481 | | ||| || ||| | | | | | ||| | | ||||| |||| | Sbjct 9175 AGAAGGCTATCGAGACCTATAACTTGATGTCTCAGAAGTATTTCACCCATGCATCTCCGA 9116 Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541 | | || || || || || | || | ||||| ||||| ||| | | || | Sbjct 9115 CTTTGTTCAATGCCGGTACCCCTCAGCCTCAGCTTGCTTCATGCTTCCTTGTCGATATGA 9056 Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601 | || ||| || |||||||||||||| | || || ||| | || ||||| | Sbjct 9055 AGGAGGATAGCATCGAAGGTATTTATGACACGCTCAAGACTTGTGCATTGATCTCTAAGA 8996 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 | |||| |||||||| | | || || ||||| | | || | | || | Sbjct 8995 CCGCTGGTGGAATTGGCCTGAATGTGCACCGCATTCGTGCTACCGGCTCTTACATTGGTG 8936 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | || ||| | || | ||| ||||||| ||| | |||| |||||| ||||||| | Sbjct 8935 GTACCAACGGTTCCTCCAATGGTATTGTTCCTATGCTTCGAGTGTTCAACAACACTGCCA 8876 Query 110722 AATATGTGAATCAAGGTGGTAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTT 110778 |||||| | || || || || | | || | ||||| |||||| | ||||||| Sbjct 8875 GATATGTTGACCAGGGAGGAAACAAGCGTCCAGGTGCTTTTGCCATCTATTTGGAACCTT 8816 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 |||| | ||| | || |||||| | || || || || || || || || ||| | Sbjct 8815 GGCACGCCGATGTTTTCGAATTCCTTGATCTCCGCAAGAACCACGGTAAGGAGGAAGTGA 8756 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 |||| |||||| | || ||||| | |||| | | || || |||||||| || ||| | | Sbjct 8755 GAGCTCGTGATCTCTTCTATGCTCTCTGGACTCCGGACTTGTTCATGAAGCGAGTTGAGG 8696 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958 || ||| |||| |||| | |||||| | | ||||| | | ||||| |||| Sbjct 8695 CCAACGGCGAGTGGACTCTCTTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTATG 8636 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAA 110985 | | || || || | || || |||| Sbjct 8635 GTGACGAATTCGAGGCGCTCTATGAAA 8609 >seq93 Length=37945 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920 ||||| || ||||| |||||| ||||| ||||| || || | ||| ||||||| Sbjct 18029 CTTGTGGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCCTTCGCCTCTATCTTC 17970 Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980 ||||| ||||||||||| |||||||| || || | || ||||| | | ||||| | Sbjct 17969 TGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACCTTCTCCAACGAGCTTATCTCTCGT 17910 Query 131981 GATGAAGCATTGCATACTGAATTTGCT 132007 ||||| | | || ||||| |||||| Sbjct 17909 GATGAGGGTCTCCACACTGACTTTGCT 17883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186748797781849