Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq93 140 5e-27 seq268 87.8 3e-11 >seq93 Length=37945 Score = 140 bits (154), Expect = 5e-27 Identities = 241/341 (71%), Gaps = 17/341 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||||||||| ||||||||||| ||| | || | Sbjct 18490 GATCTGGCAAATGTAC-AAGAAGGCTGAGGCCTCCTTCTGGACCGCCGAAGAGATTGATC 18432 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCA 1455888 | || ||||| ||| ||| ||| ||| ||||||||| | |||| Sbjct 18431 TTTCTAAGGATC---TCCACGATTGGCACAACCGCCTGAACGATGACGAGCGCTACTTCA 18375 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || | |||||| ||||| ||| || ||| ||||||||| || ||| |||||| | Sbjct 18374 TCTCTCGCGTCCTTGCCTTCTTT-GCTGCCTCCGATGGCATTGTCAACGAAAACCTGCTC 18316 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | || || | |||||| || | || || || |||| || ||||| |||||||| Sbjct 18315 GAGCGTTTCAGCGGAGAGGTGCAGATCCCTGAAGCTCGTTGCTTCTACGGTTTCCAGATT 18256 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 ||||| ||||||||||| || || ||||| || |||| || ||||| ||||||| Sbjct 18255 ATGATCGAGAACATCCACTCGGAGACATACTCTCTTTTGATTGATACCTATATCAAGGAG 18196 Query 1456069 CCGGTCGAGAA--GGACC-ACCTCTTTCGCGCCATCGACAC 1456106 || | || | | ||| |||||||| ||||||||| || Sbjct 18195 CC---CAAGCAGCGTACCTACCTCTTTGACGCCATCGATAC 18158 Score = 86.0 bits (94), Expect = 9e-11 Identities = 135/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || |||||||| ||||| || |||||| | | ||| ||||| ||| | | ||| Sbjct 18089 AAGAAGGCCGATTGGGCTATCCGCTGGATCCAGGATCAGGAG-TCGAC-CTTCGGCCAGC 18032 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | || || | ||||||||| || ||||| ||||| ||||| || ||| | | |||| Sbjct 18031 GTCTTGTGGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCCTTCGCCTCTATCT 17972 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGT 1456301 | ||||| |||||||| ||| | |||||||||||| ||| |||||| ||||| | Sbjct 17971 TCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTT-ACCTTCTCCAACGAGCTTATCTCT 17913 Query 1456302 CGCGACGA 1456309 || || || Sbjct 17912 CGTGATGA 17905 >seq268 Length=25617 Score = 87.8 bits (96), Expect = 3e-11 Identities = 192/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 259895 ATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGC 259954 ||||| ||| ||| |||||| || | || || | || |||||||| || || | Sbjct 9149 ATGTCTCAGAAGTATTTCACCCATGCATCTCCGACTTTGTTCAATGCCGGTACCCCTCAG 9090 Query 259955 CCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTAT 260014 || ||| | | || ||||| || | || ||||||| ||| ||||| || || ||| Sbjct 9089 CCTCAGCTTGCTTCATGCTTCCTTGTCGATATGAAGGAGGATAGCATCGAAGGTATTTAT 9030 Query 260015 GACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA 260074 |||||||||||| || || | ||||| ||| | || || || || || | | Sbjct 9029 GACACGCTCAAGACTTGTGCATTGATCTCTAAGACCGCTGGTGGAATTGGCCTGAATGTG 8970 Query 260075 CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTT 260134 ||| | || || | ||| | ||| | | || |||||||| ||||| || || Sbjct 8969 CACCGCATTCGTGCTACCGGCTCTTACATTGGTGGTACCAACGGTTCCTCCAATGGTATT 8910 Query 260135 GTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || || |||||||| || || ||| |||| || | || || |||||| Sbjct 8909 GTTCCTATGCTTCGAGTGTTCAACAACACTGCCAGATATGTTGACCAG 8862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177405234213858