Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20nomius_20[genbank_20GCA_5F000531055.1_202014-02-02] 4,209 sequences; 35,280,502 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq520 168 8e-37 seq67 132 5e-26 seq1627 111 2e-19 >seq520 Length=19029 Score = 168 bits (186), Expect = 8e-37 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 ||||||||||||| || ||| | ||||| ||||| | || | || | ||| | ||| Sbjct 10909 TTACCGGCAAGACCATCACTTTGGAGGTCGAGTCGAGCGACACTATCGACAATGTCAAGA 10968 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 || ||||||||||||||||| |||||||| ||||||||||| | || || ||||| | Sbjct 10969 GCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGAA 11028 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 |||| || ||||||| ||||||||| | ||||||||| |||| ||||| ||||| |||| Sbjct 11029 AGCAGCTTGAGGATGGCCGTACCCTATCCGACTATAATATCCAGAAGGAGTCCACCCTTC 11088 Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || || | ||||| || |||||| Sbjct 11089 ACCTTGTTCTTCGTCTGCGTGGTGGA 11114 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| || || || |||||||| ||| Sbjct 11413 ATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACAATCACACTGGAGGTTGAATCATCC 11472 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| | || ||||| || ||||||||||| || || |||||| Sbjct 11473 GACACAATCGACAATGTGAAGTCAAAGATTCAAGATAAGGAGGGAATCCCCCCTGACCAG 11532 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| || || ||||| || || |||| ||| ||||| | ||||| || Sbjct 11533 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACCCTGTCTGACTACAAC 11592 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||||| | || | ||| |||||||||| ||||| Sbjct 11593 ATCCAAAAGGAGTCCACATTGCACTTGGTCCTGCGTCTTCGTGGTGG 11639 Score = 152 bits (168), Expect = 6e-32 Identities = 173/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| || ||| | || |||||| || | Sbjct 11641 ATGCAGATCTTTGTCAAGACACTCACTGGCAAGACCATCACTTTGGAAGTTGAG--AGCT 11698 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| | || ||||| ||||||||||| || || || |||| Sbjct 11699 CGGACACTATCGATAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATCCCCCCGGACC 11758 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || |||||||||||||| || ||||||| || || || | ||||| | Sbjct 11759 AGCAACGTCTTATCTTTGCTGGTAAGCAGCTAGAGGATGGACGCACGCTCTCCGACTACA 11818 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| ||| | ||||| ||| ||||||| || |||||| Sbjct 11819 ACATCCAGAAGGAGAGCACCTTACATCTGGTCCTGCGTCTCCGTGGTGGA 11868 Score = 149 bits (164), Expect = 7e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 || ||||| || || || |||||||| || |||||||| ||||| | |||| ||| | Sbjct 11197 GTGAAGACTCTCACAGGAAAGACTATCACCCTTGAGGTCGAGTCGAGCGATACCATCGAC 11256 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| || || ||||||||||| || |||||||| |||||||| ||| | || Sbjct 11257 AACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAACGTTTGATC 11316 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || |||||||||||||| ||||| | || || || | ||||| ||| | || |||||| Sbjct 11317 TTCGCTGGTAAGCAACTGGAGGACGGCCGCACTCTGTCCGACTACAATATTCAGAAGGAA 11376 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||| | || |||| | || ||||| Sbjct 11377 TCCACTCTTCACTTGGTTCTGCGCTTGCGTGGTGG 11411 >seq67 Length=42833 Score = 132 bits (146), Expect = 5e-26 Identities = 142/185 (77%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || |||||||| | || | ||| Sbjct 24785 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 24844 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||||| || || |||||||||||||| || || || |||||||||||||| Sbjct 24845 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 24904 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || |||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 24905 ATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 24963 Query 27594 GGAAT 27598 || || Sbjct 24964 GGTAT 24968 >seq1627 Length=7031 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||||||||| || || |||||||||||||| || || ||||| ||||| |||||| Sbjct 3565 GACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 3506 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | ||||| || | ||||| || |||| ||||| ||||| ||||| || || | Sbjct 3505 GACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 3446 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 3445 CGCCTGCGTGGTGG 3432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570280394544080