Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq376 176 5e-39 seq792 86.0 7e-12 >seq376 Length=20092 Score = 176 bits (194), Expect = 5e-39 Identities = 549/841 (65%), Gaps = 12/841 (1%) Strand=Plus/Plus Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069 ||| || |||| ||| || || ||||| || ||||||||| |||| ||||| || Sbjct 1879 CCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAA 1938 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 | ||| | | ||| ||| || ||||| ||||| || || | |||| | | Sbjct 1939 CAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAA 1998 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | ||| || ||||| || |||| || |||| | | || || || |||||||| || Sbjct 1999 GACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACC 2058 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| || | ||||||||| |||||||| | || | || ||| |||| ||| |||||||| Sbjct 2059 CTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGA 2118 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 54307 || |||||||| ||| || || || |||||||||| | | |||| || Sbjct 2119 TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGA--GA 2176 Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCC 54366 || || || || || | || || || | || || ||| || | || || |||||||| Sbjct 2177 CCAATACCACCGGCAGTCTTGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCC 2235 Query 54367 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 54426 ||| || || || ||| |||||| || | || ||| | || || | | || Sbjct 2236 CTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGT 2295 Query 54427 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 54486 || ||||| || | || || ||||| || || || | || | || | || ||||| Sbjct 2296 ACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTA 2355 Query 54487 CGTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 54544 || || | || ||| || ||||| |||||||| || || |||||||| | Sbjct 2356 GGTTTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGG 2413 Query 54545 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAA 54604 | ||| || || | || | | |||| || | || | ||| || || | Sbjct 2414 AGGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGG 2473 Query 54605 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGT 54664 ||||| |||||||| |||||||| |||||| || ||||| | |||| | |||||||| Sbjct 2474 GTTTTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGC 2533 Query 54665 TTATCCTTATATTTGTTAACTACATC-CATGGTAATACTTGAAATAATCGGAGAATGTTT 54723 | |||| || ||| | || | || ||| | | |||| || || |||| | || Sbjct 2534 TCATCCGCATGTTTCATGACGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTT 2592 Query 54724 CCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttt 54783 | || || || |||||||||| | | ||| || || | || | || | Sbjct 2593 CTTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCT 2652 Query 54784 tGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||| | ||||| || || || || ||||| | |||||| || || ||||| || ||||| Sbjct 2653 TGTCTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATG 2712 Query 54844 T 54844 | Sbjct 2713 T 2713 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| || ||||| || || || || ||||||| || | | |||| || |||||| Sbjct 1525 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 1584 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 |||||||| || | ||| ||||| | ||| | || |||||||| |||||||| Sbjct 1585 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 1644 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 ||||||||||| || ||||| || | ||||||||| |||||| || | ||| || | | Sbjct 1645 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 1704 Query 53885 CA 53886 || Sbjct 1705 CA 1706 >seq792 Length=9982 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| ||| || || || || ||| |||||||| || | || | |||||||| Sbjct 7933 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 7874 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| ||||||||||| || ||||| || || || ||||| || ||| Sbjct 7873 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 7814 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 24277 || || || || || || || || || || || Sbjct 7813 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 7782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593694956743200