Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq406 109 6e-19 seq474 96.9 4e-15 >seq406 Length=19123 Score = 109 bits (120), Expect = 6e-19 Identities = 147/201 (73%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||| ||||| || || ||||| || | || || ||| | || |||||||| |||||| Sbjct 3060 GTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCA 3119 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 43105 ||||| ||||| ||||||||||| | || | | |||||||||| ||| | ||||| || Sbjct 3120 GCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC-TGAATCTTTGTCTT 3178 Query 43106 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 || | | | ||||| |||| || || || | |||||||| || || ||||| Sbjct 3179 GACATTGTCGATTGTGTCAGAGCTC---TCAACCTCCAGTGTGATGGTCTTTCCAGTTAG 3235 Query 43163 CGTCTTTACAAAGATTTGCAT 43183 || || || ||||| ||||| Sbjct 3236 AGTTTTGACGAAGATCTGCAT 3256 Score = 98.7 bits (108), Expect = 1e-15 Identities = 127/170 (75%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| || | ||||| || |||| || |||||||||||||| || Sbjct 3833 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAA 3892 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110 || | ||||||||||| | || | | |||||||||| ||| | || || |||| || Sbjct 3893 GATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGA-CG 3950 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | | || ||||| || ||||| || | |||||||| || || || Sbjct 3951 TTGTCGATAGTATCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 4000 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | |||||| || | || || || ||||||||||| || Sbjct 3522 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAG 3581 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 43111 || | ||||||||||| | || | | |||||||||| ||| | || || |||| ||| Sbjct 3582 ATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGA-CGT 3639 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || ||||| || ||||| |||| ||||| || || || || || ||||| | Sbjct 3640 TGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGA 3699 Query 43171 CAA 43173 ||| Sbjct 3700 CAA 3702 >seq474 Length=16299 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 149 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 208 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 209 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 267 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 268 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 327 Query 43173 AA 43174 || Sbjct 328 AA 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571791939685200