Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq376 232 6e-56 seq792 127 2e-24 seq406 93.3 4e-14 >seq376 Length=20092 Score = 232 bits (256), Expect = 6e-56 Identities = 437/639 (68%), Gaps = 8/639 (1%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || ||||| || |||| ||||||||||||| || || || | Sbjct 1895 TCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTG 1954 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || || || || ||| |||||| | ||||| || || || || || | ||||| Sbjct 1955 ACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAA 2014 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||| || |||| |||||| || || || | ||| || || ||||| || ||||| | Sbjct 2015 GGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTA 2074 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||| ||| |||| | ||||| || || | || ||||| | ||| | || Sbjct 2075 GCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCAT-TGGTACC 2133 Query 23582 GCCACACTC-GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 |||| | |||||| | || |||| | || |||| || ||| || || ||| | | Sbjct 2134 GCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACCAATACCACCGGCAGT 2193 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || ||||| || || ||||| ||||||||||||||||| ||||||||||| || Sbjct 2194 CTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTT 2253 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | |||||||| || || | || || | | ||| ||| | || |||||| || Sbjct 2254 CATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGT 2313 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 ||| || || || ||||| | ||||| || ||||| || || | ||| || Sbjct 2314 GGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGCCTTCTC 2373 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG-- 23878 |||||| | ||||| || || | ||| || ||||||| | || ||| || | |||| Sbjct 2374 AATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGGGGACGCTCGGC 2433 Query 23879 -ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 ||| | ||| || | || || || ||||| | | ||||| || ||||| || Sbjct 2434 AACCTT---GCCATTGAGACGCAATAGGTAAGAACGCTCAAGGGTTTTGAAACCAAAGTA 2490 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || ||||||||||| || |||| ||| || || || || Sbjct 2491 GTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTT 2529 >seq792 Length=9982 Score = 127 bits (140), Expect = 2e-24 Identities = 226/326 (69%), Gaps = 8/326 (2%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||| || || || ||||| || || || ||| |||||| | || || ||| || Sbjct 7782 GCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGATCTTCTGGCTG 7841 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||||||||| || || || || ||||||| | || || || || ||| Sbjct 7842 AAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGATGAG 7901 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC---G 58157 ||||| || ||||| ||||| ||| | ||| ||||||| |||| ||||| | | Sbjct 7902 GGTCTTCACACTGACTTTGCCTGCTTGCTGTTCTCTCAC---CTCAA-CAACCGCCCTAG 7957 Query 58158 CGGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | || | | |||||| |||| ||||| || || || || || ||||| | || Sbjct 7958 CAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGAC 8017 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 || || || || || | ||||| |||||| || |||||| |||| ||||| Sbjct 8018 AGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCTGATGTGCCAGTATATTGA 8077 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCG 58302 || ||||||||| | || || ||| Sbjct 8078 ATTCGTTGCCGACCGTCTACTGGTCG 8103 >seq406 Length=19123 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || ||||| | || || || ||| Sbjct 3484 ATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTCC 3425 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| ||| ||| | || || || ||| | || || ||||| Sbjct 3424 GACACAATCGACAACGTCAAGACAAAGA-TCCAAGATAAAGAGGGCATCCCACCAGACCA 3366 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || |||||||| || || | || || | ||| || || || || Sbjct 3365 GCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAA 3306 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||||||||| || ||||| || || || | ||| | || |||| Sbjct 3305 CATCCAAAAAGAATCTACCCTTCACCTTGTGCTCCGTCTGCGTGGTGGTA 3256 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| || || || || ||||| | || ||||| || Sbjct 3256 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 3197 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| ||| ||| | ||||||||| || | || || ||||| Sbjct 3196 GACACAATCGACAATGTCAAGACAAAGATTCA-GGACAAGGAGGGTATTCCACCAGACCA 3138 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| |||||| | ||||| || | ||| || || Sbjct 3137 GCAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAA 3078 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| || || ||| ||||| || ||||| ||| Sbjct 3077 CATCCAGAAGGAAAGCACTCTACACCTGGTCCTT 3044 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||||||| || | || || |||||||||||| | || || ||||| || ||| |||| Sbjct 3932 GGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGATCTTTGCTGGTAAGCAGCTGGA 3873 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| ||| | ||| || ||||||||||| || |||||||| || ||||| || Sbjct 3872 AGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGACTCTCCACCTGGTCCT 3813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445746396232800