Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq792 113 9e-20 seq376 87.8 4e-12 >seq792 Length=9982 Score = 113 bits (124), Expect = 9e-20 Identities = 282/424 (67%), Gaps = 11/424 (3%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || ||||| ||||| || ||||| || ||| | || || || || |||||| Sbjct 7779 GTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTTGCCTCGATCTTCTGG 7838 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| | || | ||||||||||||||| |||||| ||| |||| || | || Sbjct 7839 CTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCCCGTGAT 7898 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || |||||||| |||||||| ||| ||||||| | | | | || Sbjct 7899 GAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTT------CTCTCACCTCAACAACCGC 7952 Query 102098 TCAAG--AGAAAG-GATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | || |||| | | || || || ||| ||| || || ||||| | || || Sbjct 7953 CCTAGCAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTC 8012 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 || |||| | |||||| | | | || ||||||| ||| ||||| ||||||| Sbjct 8013 CTGACAGAGGCTCTGCCTTGTGCTCTCCTCGGCATGAACTCCAATCTGATGTGCCAGTAT 8072 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAA-AAGCACTATAATGT 102273 |||||||| || || || ||| |||| | | || | | || ||| ||| |||| Sbjct 8073 ATTGAATTCGTTGCCGACCGTCTACTGGTCGCTCTCGG-CAACAAGAAGTACTTCAATGC 8131 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 |||||||||||| |||||||| ||| ||||| | ||||||||||| ||||| Sbjct 8132 CACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGCAAGACCAACTTCTTTGA 8191 Query 102334 AAAG 102337 ||| Sbjct 8192 GAAG 8195 >seq376 Length=20092 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || || ||||||||||| || || || | ||| || || || || || ||||||||| Sbjct 2183 CCACCGGCAGTCTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTCAATG 2242 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | | | | | |||||| || | || || || | || ||| | Sbjct 2243 CTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCA 2302 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || ||||| |||||||||||||| || || || | | |||||||| | || |||||| Sbjct 2303 TTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCA 2362 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 | | | | ||||| |||||||| || || || |||||||| | | || || Sbjct 2363 AGGGCCTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGG 2422 Query 95032 GGGCGCTC 95039 || ||||| Sbjct 2423 GGACGCTC 2430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989538482228450