Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq376 185 1e-41 >seq376 Length=20092 Score = 185 bits (204), Expect = 1e-41 Identities = 551/841 (66%), Gaps = 12/841 (1%) Strand=Plus/Plus Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| || |||| ||| || || ||||| || ||||||||| |||| ||||| || Sbjct 1879 CCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAA 1938 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 | ||| | | ||| ||| || ||||| ||||| || || | |||| | | Sbjct 1939 CAAATCACGAGCTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAA 1998 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| || ||||| || |||| || ||||| | | || || || |||||||| || Sbjct 1999 GACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACC 2058 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | ||||||||| |||||||| | || | || ||| |||| ||| || || || Sbjct 2059 CTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGA 2118 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA--TTGATAGA 63545 | |||||||||||| || || || |||||||||| | | ||| ||| Sbjct 2119 TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTG--AGA 2176 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTGTCATAGATGCC 63604 || || || || || | || || || | || || ||| || | ||||| |||||||| Sbjct 2177 CCAATACCACCGGCAGTCTTGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCC 2235 Query 63605 TTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGT 63664 || ||||| || || |||||| || | || ||| | || || | | | || Sbjct 2236 CTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGT 2295 Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724 || ||||| || | || || ||||| || || || | || | || | || ||||| Sbjct 2296 ACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTA 2355 Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63782 || |||| || ||| || ||||| |||||||| || || |||||||| | Sbjct 2356 GGTTTCAAGGGC--CTTCTCAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGG 2413 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | ||| || || | || ||| ||| || | ||| | ||| || || | Sbjct 2414 AGGTGTTGGGGACGCTCGGCAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGG 2473 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 ||||| |||||||| |||||||| |||||| || ||||| | |||| | || |||||| Sbjct 2474 GTTTTGAAACCAAAGTAGTTGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGC 2533 Query 63903 TTATCCTTATATTTGTTAACTATATC-CATGGTAATACTTGAAATAATCGGAGAATGTTT 63961 | |||| || ||| | || || || ||| | | |||| || || |||| | || Sbjct 2534 TCATCCGCATGTTTCATGACGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTT 2592 Query 63962 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 64021 | || || || || ||||||| | | | ||| || || | || | || | Sbjct 2593 CTTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCT 2652 Query 64022 tGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 ||| | |||||| || || || | ||||| | ||||| || || ||||| || ||||| Sbjct 2653 TGTCTGCTTGTGGAGGTTGGAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATG 2712 Query 64082 T 64082 | Sbjct 2713 T 2713 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| || ||||| || || || || ||||||| || | | |||| || |||||| Sbjct 1525 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 1584 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 |||||||| || | ||||||||| | ||| | || |||||||| |||||||| Sbjct 1585 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 1644 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 ||||||||||| || ||||| || | ||||||||| |||| | || | ||| || | | Sbjct 1645 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 1704 Query 63123 CA 63124 || Sbjct 1705 CA 1706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629789336935200