Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015-
04-30] 3,590 sequences; 24,273,657 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq421 107 2e-18
>seq421
Length=18474
Score = 107 bits (118), Expect = 2e-18
Identities = 205/297 (69%), Gaps = 14/297 (5%)
Strand=Plus/Plus
Query 21111 ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169
|| || ||||| | |||| | || || || ||||| |||||| ||| || ||||| ||
Sbjct 5927 ACATAGAACTG-CGCAAACATATGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGG 5985
Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC-----C 21224
||||||||| ||| | |||||| || ||| || ||| || || | |
Sbjct 5986 GTTCCACGCCGACAGGATGATGCGGCGGTCGAACGGG-----GTTTCTTTGAGCTTGCGC 6040
Query 21225 ACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTAC 21284
|| || | ||||||||| || ||| | ||| ||| | || | || || ||||
Sbjct 6041 ACGACCTCGGCCAGCTGGTCGACGCCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTAC 6100
Query 21285 TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGG 21344
|||||||| ||||| | |||||||||||||||||| || ||||| ||||||||| |||
Sbjct 6101 TCCGCCCCGAAATGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGG 6160
Query 21345 TCCCCGAAGCCCTGCGC-CGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400
| | | ||||| ||| ||| || ||||| ||||| ||||||| || ||
Sbjct 6161 TGCGC-CAGCCCAACGCGATCCAGGAACTCGCGGCTCCCGTTGCCGTCCCAGATCTT 6216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427757283463200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |