Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq421 107 2e-18 >seq421 Length=18474 Score = 107 bits (118), Expect = 2e-18 Identities = 205/297 (69%), Gaps = 14/297 (5%) Strand=Plus/Plus Query 21111 ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGG 21169 || || ||||| | |||| | || || || ||||| |||||| ||| || ||||| || Sbjct 5927 ACATAGAACTG-CGCAAACATATGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGG 5985 Query 21170 GTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC-----C 21224 ||||||||| ||| | |||||| || ||| || ||| || || | | Sbjct 5986 GTTCCACGCCGACAGGATGATGCGGCGGTCGAACGGG-----GTTTCTTTGAGCTTGCGC 6040 Query 21225 ACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTAC 21284 || || | ||||||||| || ||| | ||| ||| | || | || || |||| Sbjct 6041 ACGACCTCGGCCAGCTGGTCGACGCCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTAC 6100 Query 21285 TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGG 21344 |||||||| ||||| | |||||||||||||||||| || ||||| ||||||||| ||| Sbjct 6101 TCCGCCCCGAAATGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGG 6160 Query 21345 TCCCCGAAGCCCTGCGC-CGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 | | | ||||| ||| ||| || ||||| ||||| ||||||| || || Sbjct 6161 TGCGC-CAGCCCAACGCGATCCAGGAACTCGCGGCTCCCGTTGCCGTCCCAGATCTT 6216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427757283463200