Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015-
04-30] 3,590 sequences; 24,273,657 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq406 86.0 6e-12
>seq406
Length=19123
Score = 86.0 bits (94), Expect = 6e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| ||||||||||| || ||| | || | |||||| ||||| ||||||
Sbjct 3828 GTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTACCA 3887
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TT 139686
||| |||||| ||| ||||| || || || || || || ||||| ||| | || || ||
Sbjct 3888 GCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTC-CTGAATCTTGGTCTT 3946
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| | || | || ||| | | ||||||||||| ||| | ||||| |||||
Sbjct 3947 GACGTTGTCGATAGTATCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 4000
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 139574 TCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAG 139633
|| || || ||||| || ||| | |||| | ||||| |||||||||||||| ||
Sbjct 3066 TCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAG 3125
Query 139634 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTG 139692
|| ||||| ||||| || || || || || || ||||| ||| | ||||| || | |
Sbjct 3126 ATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTC-CTGAATCTTTGTCTTGACATT 3184
Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752
|| | |||||| | | ||| ||||| | || | ||||| || || | ||||| ||
Sbjct 3185 GTCGATTGTGTCAGAGCTCTCAACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGAC 3244
Query 139753 GAATATTTGCATA 139765
||| || ||||||
Sbjct 3245 GAAGATCTGCATA 3257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496041739128000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |