Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq376 190 3e-43 seq792 95.1 2e-14 >seq376 Length=20092 Score = 190 bits (210), Expect = 3e-43 Identities = 541/822 (66%), Gaps = 12/822 (1%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || ||||| || ||||||||| |||| ||||| || | ||| | | ||| Sbjct 1898 ACCCGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAACAAATCACGAGCTCTGACT 1957 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || ||||| ||||| || || | |||| | | | ||| || ||||| || Sbjct 1958 TCTTCCTTTCCGTGGTTCTTACGGAGGTCCAAGAACTCAAAGACATCGGAGTGCCAAGGC 2017 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 |||| || ||||| | | || || || |||||||| ||||| || | ||||||||| Sbjct 2018 TCCAGATAAATGGCAAATGCACCTGGACGCTTGTTTCCACCCTGGTCAACGTATCTAGCA 2077 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 |||||||| | || | || ||| |||| ||| |||||||||| |||||||| ||| Sbjct 2078 GTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGATGAGCCATTGGTACCGCCA 2137 Query 72262 ATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTT 72319 || || || |||||||||| || |||| |||| || || || || | | Sbjct 2138 ATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGA--GACCAATACCACCGGCAGTCT 2195 Query 72320 TAGAGATTAATGCGCATCGTTTTAAC-GTATCATAGATGCCCTCTATACTATCATCCATC 72378 | || || | || || ||| || | || || ||||||||||| || || || ||| || Sbjct 2196 TGGAAATCATAGCACA-CGTCTTCAGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTC 2254 Query 72379 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438 |||| || | || ||| | || || | | || || ||||| || | || Sbjct 2255 ATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTG 2314 Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCT 72498 || ||||| || || || | || | |||| || ||||| || |||| || |||| Sbjct 2315 GGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGTTTCAAGGGC--CTTCT 2372 Query 72499 ATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAA 72556 || ||||| || ||||| || || |||||||| | | || || || | || Sbjct 2373 CAATGTCATTGCCGTGAATTCCAACGGCAACACGCATCAGGAGGTGTTGGGGACGCTCGG 2432 Query 72557 CGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 72616 | | |||| ||| | ||| | ||| || || | ||||| |||||||| |||| Sbjct 2433 CAACCTTGCCATTGAGACGCAATAGGTAAGAACGCTCAAGGGTTTTGAAACCAAAGTAGT 2492 Query 72617 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAA 72676 |||| |||||| || ||||| | |||| | || ||||| | |||| || ||| | | Sbjct 2493 TGTAGTTAAAGTCCCGGTCGTACACAATAGCGGAGTTGAGCTCATCCGCATGTTTCATGA 2552 Query 72677 CTATATC-CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 72735 | || || ||| | | |||| || || |||| | ||| || || || || ||| Sbjct 2553 CGATTTCATATGTTTCT-TTTGAGATCATAGGAGCAGACTTCTTGTTCTTGGGGTTGACA 2611 Query 72736 TAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTT 72795 |||| | | | ||| || || | || | || |||| | |||||| || || Sbjct 2612 TAGTGGTAGAGATCTGAGATAACCAGAGAGAACTGCTTCCTTGTCTGCTTGTGGAGGTTG 2671 Query 72796 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 || || ||||| | ||||| || || ||||| ||||||||| Sbjct 2672 GAAACTGCTATACGAGCGGCCAGGATAGCATAGTCTGGATGT 2713 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 71698 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCA 71757 |||| || ||||| || || || || ||||||| || | | |||| ||||| ||| Sbjct 1525 GCAAGCGAAGCCAGGTTGCAGACAGCAACCTCATCAGGAGCACTGTATTCAATAATCTCA 1584 Query 71758 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 71817 |||||||| || | ||| ||||| | ||| | || |||||||| |||||||| Sbjct 1585 GTGCAAAGGTTGGAGCTGCGGATAGTTCCCAGATTCTTCTGGTTACTCTTCTTGTTACAA 1644 Query 71818 GCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 71877 ||||||||||| || || || || | ||||||||| |||| | || | ||| || | | Sbjct 1645 GCATCCTTATACAGCATGAAGGGGTTTCCAGTTTCAGTCTGGGCCTCCAGAATAGCATAC 1704 Query 71878 CA 71879 || Sbjct 1705 CA 1706 >seq792 Length=9982 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| ||| || || || || ||| ||||||||||| | || | |||||||| Sbjct 7933 AACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGGGAGATGAGCTCGTTGGAG 7874 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| ||||||||||| || ||||| || || || ||||| || ||| Sbjct 7873 AAGGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGAGGCAAAGGAGCCA 7814 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 || || ||||| || || || || || || || Sbjct 7813 GAGAAAAAGATACCCTCAACAGCAGCGAAAGC 7782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671109082628400