Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq406 125 2e-23 >seq406 Length=19123 Score = 125 bits (138), Expect = 2e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| || ||||| | || || || ||||| || ||| Sbjct 3516 GTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCA 3575 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||| || ||||| || || || || || ||||||||||| | || Sbjct 3576 GCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTG 3635 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||||||| || ||||| || || |||||||||||||| || || Sbjct 3636 ACGTTGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTC 3695 Query 104543 TTTACAA 104549 || |||| Sbjct 3696 TTGACAA 3702 Score = 120 bits (132), Expect = 7e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || | || | ||| || || |||| || ||| ||||| || || ||||| | Sbjct 3028 TTCCACCACGGAGGCGAAGGACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGG 3087 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 | || || | || |||||||| ||||| ||||| || || || | ||| || || || | Sbjct 3088 AGAGCGTGCGCCCATCTTCTAGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTG 3147 Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCT 104509 | || || || || ||||||||||||| || ||||| || | || || || | || Sbjct 3148 GAATACCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATTGTGTC-AGAGCTCTCA 3206 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| ||||| || ||||| ||||| || ||||| || || |||||||| Sbjct 3207 ACCTCCAGTGTGATGGTCTTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 3256 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||||||||| || || || ||||| || ||||| | ||| || || ||||| |||||| Sbjct 3288 GTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCAAGTTGCTTTCCA 3347 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | || || || || || || || |||||||| || ||||||| || Sbjct 3348 GCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCTTGGATCTTTGTCTTG 3407 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || ||| || | || ||||| ||||| || ||||| ||||| || || Sbjct 3408 ACGTTGTCGATTGTGTCG-GAGCTCTCGACCTCCAGTGTGATGGTCTTTCCAGTGAGAGT 3466 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 3467 CTTGACGAAGATCTGCAT 3484 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | || || || || | || || || || ||||| || ||||| Sbjct 3795 ATTCCACCACGCAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCG 3854 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | |||||||| || || || |||||||| || | | ||| || ||||| Sbjct 3855 GAGAGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGG 3914 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || ||||||||||| | || || || || | |||||||||| || Sbjct 3915 GGGATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCC 3974 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || || || ||||| || || Sbjct 3975 ACCTCAAGGGTGATGGTCTTTCCGGT 4000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151345439271720