Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq421 93.3 3e-14 >seq421 Length=18474 Score = 93.3 bits (102), Expect = 3e-14 Identities = 133/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 25737 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAA 25796 |||||| || || |||| |||| ||| || | | | |||| |||||| || ||||| Sbjct 6052 CAGCTGGTCGACGCCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTACTCCGCCCCGAA 6111 Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856 || || |||||||||||||||||| || || ||||| || || ||| |||| | |||| Sbjct 6112 ATGCCGCCACTGGAACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGGTGCGC-CAGCC 6170 Query 25857 CCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGG 25915 | | ||||| || || | | || ||| ||||||||||||| | ||| | ||| Sbjct 6171 CAACGCGATCCAGGAACTCGCGGCTCCCGTTGCCGTCCCAGATCTTGATCCCGGCCGCGG 6230 Query 25916 AGAGC 25920 | ||| Sbjct 6231 AAAGC 6235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340122717917070