Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq406 89.7 4e-13 >seq406 Length=19123 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| ||| ||||| || |||||||| || | || | || || | |||||||| || Sbjct 3510 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGC-CATCCTCCAGTTG 3568 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | || ||||||||||| || || | || ||||||||| ||| || Sbjct 3569 CTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTT 3628 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || || |||||| |||||||| ||||| || || || ||||| Sbjct 3629 GGTCTTGACGTTGTCG--ATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCA 3686 Query 48701 GTGAGAGTTTTCACAA 48716 ||||| || || |||| Sbjct 3687 GTGAGGGTCTTGACAA 3702 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||||||||||||||| || | | || |||| |||||||||||||| | | Sbjct 3833 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAA 3892 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || ||||||||||| || || | || ||||||||| ||| || ||||| | Sbjct 3893 GATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTT 3952 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGA 48704 | || || |||||| |||||||| ||| | || ||||| || ||||||| Sbjct 3953 GTCG--ATAGTATCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTGA 4002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421232768943590