Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015-
04-30] 3,590 sequences; 24,273,657 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq406 89.7 4e-13
>seq406
Length=19123
Score = 89.7 bits (98), Expect = 4e-13
Identities = 140/196 (71%), Gaps = 6/196 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
||||| ||| ||||| || |||||||| || | || | || || | |||||||| ||
Sbjct 3510 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGC-CATCCTCCAGTTG 3568
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
|||||| | | || ||||||||||| || || | || ||||||||| ||| ||
Sbjct 3569 CTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTT 3628
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || || |||||| |||||||| ||||| || || || |||||
Sbjct 3629 GGTCTTGACGTTGTCG--ATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCA 3686
Query 48701 GTGAGAGTTTTCACAA 48716
||||| || || ||||
Sbjct 3687 GTGAGGGTCTTGACAA 3702
Score = 84.2 bits (92), Expect = 2e-11
Identities = 123/172 (72%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||||||||||||||| || | | || |||| |||||||||||||| | |
Sbjct 3833 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAA 3892
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| ||||||||||| || || | || ||||||||| ||| || ||||| |
Sbjct 3893 GATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTT 3952
Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGA 48704
| || || |||||| |||||||| ||| | || ||||| || |||||||
Sbjct 3953 GTCG--ATAGTATCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTGA 4002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421232768943590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |