Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq406 86.0 5e-12 >seq406 Length=19123 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | ||| |||| || || ||||| ||||| || ||||||||||||| Sbjct 3485 CCCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 3544 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | | ||||||| ||| || || ||| | || | ||||| ||||| || Sbjct 3545 CAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGG 3604 Query 16828 CACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| ||| ||| | ||| || | | | | ||| |||| | |||| Sbjct 3605 GATACCCTCCTTGTCCTGAATCTTGGT-CTTGACGTTGTCGATAGTATCGCTAGACTCCA 3663 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAA 16925 || | |||||| || || || || || || ||||||| Sbjct 3664 CCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 3702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405070276134100