Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015-
04-30] 3,590 sequences; 24,273,657 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq406 127 2e-24
seq1809 84.2 2e-11
>seq406
Length=19123
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || |||||| |||| || || || |||| || || || || | | |
Sbjct 3256 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 3197
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| ||| ||||| |||||||||||||||||||| || ||
Sbjct 3196 GACACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 3137
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || || || |||||| |||| ||| ||||| ||||||| ||||||
Sbjct 3136 CAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAAC 3077
Query 22399 ATTCAAAAAGAATCCACCATACA 22421
|| || || ||| ||| ||||
Sbjct 3076 ATCCAGAAGGAAAGCACTCTACA 3054
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288
|||| || || | || ||||| || |||| || || ||||| | | |||||| | |
Sbjct 3702 TTGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGATACTATCG 3643
Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348
|| | |||| || ||||| |||||||||||||| || || || || || ||| | |
Sbjct 3642 ACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGA 3583
Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408
| ||||| || || || | |||||| |||||| | ||||| |||||||| || || |
Sbjct 3582 TCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGG 3523
Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| | || | ||| |||| |||| || ||
Sbjct 3522 AATCCACCCTTCACCTGGTTCTGCGTCTGCGTGGTGG 3486
Score = 100 bits (110), Expect = 2e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| ||||| | | |||||| | ||| | ||||
Sbjct 4000 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGATACTATCGACAACGTCAAGACC 3941
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| |||||||||||||| || || || || || ||| | || ||||| || ||
Sbjct 3940 AAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGATCTTTGCTGGTAAG 3881
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || || ||| || ||||||| |||||||||||||| || || ||
Sbjct 3880 CAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGAC 3828
Score = 98.7 bits (108), Expect = 8e-16
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || ||| | || || || || |||| || || || || | | |
Sbjct 3485 GATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTC 3426
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| || | ||| | |||| ||| || ||||| || ||||| || ||||| || ||
Sbjct 3425 CGACACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACCA 3366
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||||||| || || || || || || | |||||| || || | || || |||||
Sbjct 3365 GCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAA 3306
Query 22398 CATTCAAAAAGAATCCACC 22416
||| ||||||||||| |||
Sbjct 3305 CATCCAAAAAGAATCTACC 3287
>seq1809
Length=1036
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/120 (76%), Gaps = 3/120 (3%)
Strand=Plus/Minus
Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356
||| ||||||| ||||||||||||||| || || || || || ||||| || || |||
Sbjct 792 AAAAAAAAAAT---AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCC 736
Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
|| || ||| | |||||| |||||| | || || |||||||| || || || || |||
Sbjct 735 GGTAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACC 676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419709635588350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |