Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq406 127 2e-24 seq1809 84.2 2e-11 >seq406 Length=19123 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||| |||| || || || |||| || || || || | | | Sbjct 3256 ATGCAGATCTTCGTCAAAACTCTAACTGGAAAGACCATCACACTGGAGGTTGAGAGCTCT 3197 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| ||| ||||| |||||||||||||||||||| || || Sbjct 3196 GACACAATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGTATTCCACCAGACCAG 3137 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || |||||| |||| ||| ||||| ||||||| |||||| Sbjct 3136 CAGCGTCTCATCTTCGCTGGTAAACAGCTAGAAGATGGGCGCACGCTCTCCGACTACAAC 3077 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 || || || ||| ||| |||| Sbjct 3076 ATCCAGAAGGAAAGCACTCTACA 3054 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288 |||| || || | || ||||| || |||| || || ||||| | | |||||| | | Sbjct 3702 TTGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTAGCGATACTATCG 3643 Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348 || | |||| || ||||| |||||||||||||| || || || || || ||| | | Sbjct 3642 ACAACGTCAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGA 3583 Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408 | ||||| || || || | |||||| |||||| | ||||| |||||||| || || | Sbjct 3582 TCTTTGCTGGTAAGCAACTGGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGG 3523 Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| | || | ||| |||| |||| || || Sbjct 3522 AATCCACCCTTCACCTGGTTCTGCGTCTGCGTGGTGG 3486 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| ||||| | | |||||| | ||| | |||| Sbjct 4000 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCTAGCGATACTATCGACAACGTCAAGACC 3941 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| |||||||||||||| || || || || || ||| | || ||||| || || Sbjct 3940 AAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTTTGATCTTTGCTGGTAAG 3881 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || || ||| || ||||||| |||||||||||||| || || || Sbjct 3880 CAGCTGGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAGGAGTCGAC 3828 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || ||| | || || || || |||| || || || || | | | Sbjct 3485 GATGCAGATCTTCGTCAAGACTCTCACTGGAAAGACCATCACACTGGAGGTCGAGAGCTC 3426 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| || | ||| | |||| ||| || ||||| || ||||| || ||||| || || Sbjct 3425 CGACACAATCGACAACGTCAAGACAAAGATCCAAGATAAAGAGGGCATCCCACCAGACCA 3366 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 |||||||| || || || || || || | |||||| || || | || || ||||| Sbjct 3365 GCAACGTCTCATCTTCGCTGGAAAGCAACTTGAGGATGGTCGTACTCTGTCGGACTACAA 3306 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| ||||||||||| ||| Sbjct 3305 CATCCAAAAAGAATCTACC 3287 >seq1809 Length=1036 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 22297 AAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCC 22356 ||| ||||||| ||||||||||||||| || || || || || ||||| || || ||| Sbjct 792 AAAAAAAAAAT---AGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTGATCTTCGCC 736 Query 22357 GGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 || || ||| | |||||| |||||| | || || |||||||| || || || || ||| Sbjct 735 GGTAAGCAGCTCGAGGATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACC 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419709635588350