Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq792 145 2e-29 seq275 89.7 1e-12 >seq792 Length=9982 Score = 145 bits (160), Expect = 2e-29 Identities = 279/407 (69%), Gaps = 16/407 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | |||||| | || ||||| ||||||||| ||||||||||| ||| Sbjct 8191 TCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATAGACTCCATGAAATCGAAGGGGTTGGTG 8132 Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 |||||| |||| |||| | ||| || || || | | ||||| || || || || Sbjct 8131 GCATTGAAGTACTTCTTG---TTGCCGAGAGCGACCAGTAGACGGTCGGCAACGAATTCA 8075 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | |||||| | |||||| | ||||||||||| | | | |||||| | ||||| Sbjct 8074 ATATACTGGCACATCAGATTGGAGTTCATGCCGAGGAGAGCACAAGGCAGAGCCTCTGTC 8015 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT--GTGCCA 251794 | ||| ||||| || ||||||| ||||| | || ||| ||||| ||| | Sbjct 8014 AGGAACTCCTTCTCAATGGCAACAGCCTCAATGATGATGTCCTCAACCACCTTCTTGCTA 7955 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCT 251854 | | | ||||| || | ||| |||| | | |||| | ||| ||||||| Sbjct 7954 GGG--CGGTTGTT---GAGGTGAGAGAACAGCAAGCAGGCAAAGTCAGTGTGAAGACCCT 7900 Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914 | || || ||||| ||||||||| | || |||||||||| ||||| ||| | | Sbjct 7899 CATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGGCCACGCTTCTTCA 7840 Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||||| | | |||||| |||||||| | | |||||| ||| Sbjct 7839 GCCAGAAGATCGAGGCAAAGGAGCCAGAGAAAAAGATACCCTCAACA 7793 >seq275 Length=24353 Score = 89.7 bits (98), Expect = 1e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| |||||||| || || |||||| ||||| | || | | || Sbjct 2660 CTCACTCCCGCATGCGCGGTCTGTCCGGTGGCCAGCGTGTCAAGGTCGTGCTTGCTGCTT 2719 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| ||||| | |||||||| ||||| || ||||||||||||||||| || ||||| Sbjct 2720 GCTCC-TGGCAGCGTCCTCACGTCATCGTCCTGGACGAGCCTACCAACTACCTCGACCGT 2778 Query 280821 GAGAGCCTGGGCGCTCTG 280838 || ||| || |||||| Sbjct 2779 GACTCCCTTGGTGCTCTG 2796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027789522719190