Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq792 224 2e-53 seq376 143 5e-29 >seq792 Length=9982 Score = 224 bits (248), Expect = 2e-53 Identities = 366/519 (71%), Gaps = 15/519 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| | |||||||| | ||||| |||| |||||| || || || | || Sbjct 7704 CCCTGCATTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAATCTACC 7763 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 || | | | | || ||||| || | || || ||||| ||||| ||||| ||| |||| Sbjct 7764 TTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTT 7823 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAACG 42810 ||||| ||||||||||| ||| || ||| | |||||| || ||||||||||| |||| Sbjct 7824 GCCTCGATCTTCTGGCTGAAGAAG--CGTGGCCTGATGCCTGGTCTCACCTTCTCCAACG 7881 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | | || ||||| || || | |||||||||||| | |||||||| | Sbjct 7882 AGCTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTTGCTGTTCTC---TC 7938 Query 42871 ACCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGG 42927 |||||| |||| ||||| | ||| || ||| || |||||||| ||||| || | Sbjct 7939 ACCTCA---ACAACCGCCCTAGCAAGAAGGTGGTTGAGGACATCATCATTGAGGCTGTTG 7995 Query 42928 AGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCAC 42986 || |||||||||||||| || || | ||||| ||| | || ||||||||||| | Sbjct 7996 CCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTG-CTCTCCTCGGCATGAACTCC 8054 Query 42987 GACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC 43046 | || |||||| |||| || | | ||| ||||||| ||| ||| | | || | Sbjct 8055 AATCTGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTACTGGTCGCTCTCGGCAAC 8114 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 | || ||| | | ||||||||| || |||||| ||||| | | ||| Sbjct 8115 AAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAGTCTATCTCCCTTGCTGGC 8174 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| || |||||||| || | || |||||| Sbjct 8175 AAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTACCAG 8213 >seq376 Length=20092 Score = 143 bits (158), Expect = 5e-29 Identities = 359/536 (67%), Gaps = 22/536 (4%) Strand=Plus/Plus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCC-GGGC 244973 ||| || || ||||||||| ||| |||| || | | ||| ||| | ||| |||| Sbjct 1810 GTAAAGAGCATCGAACTCGTCGCCGTAGACATCAGCCAAGCCAGGGGCCT-CGCTAGGGC 1868 Query 244974 ACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGA 245033 | | ||| |||| || ||| | ||| |||| || |||||| || || || |||||| Sbjct 1869 AGAAGAGGGTCCAGTCACCGTTGGCCTCAACCCGCTTCATGAACAGATCAGGAGTCCAGA 1928 Query 245034 GGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCAGCTC 245091 | || | ||| | || | | ||||| || ||| || |||||| | || || Sbjct 1929 GAGCGTAGAACAAATCACGAG--CTCTGACTTCTTCCTTTCCGTGGTTCTTACGGAGGTC 1986 Query 245092 CAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCG 245151 ||| || |||||||| ||| |||||| ||||||| || | || | || || || || Sbjct 1987 CAAGAACTCAAAGACATCGGAGTGCCAAGGCTCCAGATAAATGGCAAATGCACCTGGACG 2046 Query 245152 CTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGC-GCGTT---GAAGATGCGCAGGGTAG 245207 |||||| || |||||||| || | || ||| | ||| ||| | |||||| | | Sbjct 2047 CTTGTTTCCACCCTGGTCAACG----TATCTAGCAGTGTTATTGAACACGCGCAGCATGG 2102 Query 245208 GCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGT 245267 | || || || || || ||| ||||| || ||||| | || || | | | Sbjct 2103 GAACAATTCCATTGGATGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAA--- 2159 Query 245268 TGCTGATGGACATG----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTG 245323 ||| ||||||| | || | || ||||| |||||| || | || || |||| Sbjct 2160 TGC-GATGGACGTTGAGACCAATACCACCGGCAGTCTTGGAAATCATAGCACACGTCTTC 2218 Query 245324 ATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGAC 245383 | ||||| |||||||| ||||||||| |||||||| | || |||||||| | | Sbjct 2219 AGTGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCC 2278 Query 245384 AGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||||| |||| |||| | | | ||||||||||||||| || || || ||||| Sbjct 2279 AGCTGAGGCTGGGGGGTACCAGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTA 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944296822778400