Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq792 84.2 5e-11 >seq792 Length=9982 Score = 84.2 bits (92), Expect = 5e-11 Identities = 172/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||| || || |||| | || ||||| ||| | || ||| | || || Sbjct 7977 ATCATCATTGAGGCTGTTGCCATTGAGAAGGAGTTCCTGACAGAGGCTCTGCCTTGTGCT 8036 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | || ||| | ||||| || |||||||| |||||||| | Sbjct 8037 CTCCTCGGCATGAACTCCAATCTGATGTGCCAGTATATTGAATTCGTTGCCGACCGTCTA 8096 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| || || | |||| | ||| ||| |||||||| | || |||||| Sbjct 8097 CTGGTCGCTCTCGGCAACAAGAAGTACTTCAATGCCACCAACCCCTTCGATTTCATGGAG 8156 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740 || || ||| || || || |||||||| || |||||||| ||||||| || | | Sbjct 8157 TCTATCTCCCTTGCTGGCAAGACCAACTTCTTTGAGAAGCGTGTGGGTGATTACCAGAAG 8216 Query 243741 CCCTGGTGTGATG 243753 || ||||| ||| Sbjct 8217 GCC-GGTGTTATG 8228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102829270966500