Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq406 113 5e-20 seq474 96.9 4e-15 >seq406 Length=19123 Score = 113 bits (124), Expect = 5e-20 Identities = 148/201 (74%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||| ||||| || || ||||| || | || || ||| | || |||||||| |||||| Sbjct 3060 GTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCTAGCTGTTTACCA 3119 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TT 42130 ||||| ||||| ||||||||||| | ||| | | |||||||||| ||| | ||||| || Sbjct 3120 GCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCC-TGAATCTTTGTCTT 3178 Query 42131 GAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 || | | | ||||| |||| || || || | |||||||| || || ||||| Sbjct 3179 GACATTGTCGATTGTGTCAGAGCTC---TCAACCTCCAGTGTGATGGTCTTTCCAGTTAG 3235 Query 42188 CGTCTTTACAAAGATTTGCAT 42208 || || || ||||| ||||| Sbjct 3236 AGTTTTGACGAAGATCTGCAT 3256 Score = 98.7 bits (108), Expect = 1e-15 Identities = 127/170 (75%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||| || | ||||| || |||| || |||||||||||||| || Sbjct 3833 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAA 3892 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135 || | ||||||||||| | || | | |||||||||| ||| | || || |||| || Sbjct 3893 GATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGA-CG 3950 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | | || ||||| || ||||| || | |||||||| || || || Sbjct 3951 TTGTCGATAGTATCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 4000 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | |||||| || | || || || ||||||||||| || Sbjct 3522 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAG 3581 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGT 42136 || | ||||||||||| | || | | |||||||||| ||| | || || |||| ||| Sbjct 3582 ATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGAATCTTGGTCTTGA-CGT 3639 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || ||||| || ||||| |||| ||||| || || || || || ||||| | Sbjct 3640 TGTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGA 3699 Query 42196 CAA 42198 ||| Sbjct 3700 CAA 3702 >seq474 Length=16299 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 149 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 208 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 209 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 267 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 268 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 327 Query 42198 AA 42199 || Sbjct 328 AA 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543188423325600