Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq376 163 3e-35 >seq376 Length=20092 Score = 163 bits (180), Expect = 3e-35 Identities = 404/608 (66%), Gaps = 4/608 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||||| || ||| || ||||| | | ||||| Sbjct 2499 AACTACAACTACTTTGGTTTCAAAACCCTTGAGCGTTCTTACCTATTGCGTCTCAATGGC 2440 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| ||||||| || || || || |||||||| || ||| | || ||||||||| | Sbjct 2439 AAGGTTGCCGAGCGTCCCCAACACCTCCTGATGCGTGTTGCCGTTGGAATTCACGGCAAT 2380 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 ||||| ||| | | | | || |||| | ||| | || |||| | Sbjct 2379 GACATTGAGAAGGCCCTTGAAACCTACAACCTCATGTCCCAGAAGTACTTCACACATG-C 2321 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 |||| || |||||||| || || ||||| ||| ||| || | || || ||| || | Sbjct 2320 TTCCCCCACTCTGTTCAATGCTGGTACCCCCCAGCCTCAGCTGGCATCCTGCTTCTTGGT 2261 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| ||| || || | ||||| || ||| ||||| | | Sbjct 2260 TGAC-ATGAAGGAGGACAGCATTGAGGGCATCTACGACACACTGAAGACGTGTGCTATGA 2202 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 | || || || || || || || ||| ||||| | | ||||||| ||||| | Sbjct 2201 TTTCCAAGACTGCCGGTGGTATTGGTCTCAACGTCCATCGCATTCGTGCCACAGGTTCTT 2142 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| |||||||||||||| | ||||| || | || || ||||| || || ||||| | Sbjct 2141 ACATTGGCGGTACCAATGGCTCATCCAATGGAATTGTTCCCATGCTGCGCGTGTTCAATA 2082 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || | ||||| ||||||||||| | | | ||| | || || | |||| Sbjct 2081 ACACTGCTAGATACGTTGACCAGGGTGGAAACAAGCGTCCAGGTGCATTTGCCATTTATC 2022 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| |||||| | || || | ||| | ||||| || ||||||||||| || | Sbjct 2021 TGGAGCCTTGGCACTCCGATGTCTTTGAGTTCTTGGACCTCCGTAAGAACCACGGAAAGG 1962 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | || || | || | ||||||||||||||| || || || || ||||| | Sbjct 1961 AAGAAGTCAGAGCTCGTGATTTGTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGC 1902 Query 94313 GCGTCGAG 94320 | || ||| Sbjct 1901 GGGTTGAG 1894 Score = 102 bits (112), Expect = 8e-17 Identities = 215/318 (68%), Gaps = 2/318 (1%) Strand=Plus/Minus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 || || || || || |||||||| ||| ||| || ||||||||| ||||||| Sbjct 1083 CTTCTGGTTGCTCCTATGCCCACCGCCAGCACCAGTCAAATCCTTGGCTTTAACGAGTGC 1024 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214 ||||| || | |||||| ||| | ||| | || || || || || || |||| || Sbjct 1023 TTCGAGCCTTACACCTCGAACATCTACTCTCGCCGTGTCCTTGCGGGCGAGTTCCAAGTT 964 Query 95215 ATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAA 95273 ||||| | || ||| || | || | || || | ||| ||||| | || Sbjct 963 GTCAACCCCTGGTTGCTGAAGGATCTAGTCGAC-CTTGGCCTCTGGTCCGACAACATGAA 905 Query 95274 GAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACAT 95333 ||||| | | || || || ||||| |||||||||||| | || || |||||| Sbjct 904 GAACCGTATCATTGCCGACAGTGGTTCCGTTCAGAACATCCCGAATATTCCCTCGGACAT 845 Query 95334 CAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGC 95393 |||||| || |||||||||||||||||||| | |||||| ||| || || || || Sbjct 844 CAAGGCTCTATACAAGACCGTGTGGGAGATTTCCCAGCGCCGGATCCTGGAGATGGCTGC 785 Query 95394 CGCCCGCGGGCCCTTCAT 95411 | ||| || ||||||| Sbjct 784 TGACCGTGGTGCCTTCAT 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700999296400