Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq474 132 5e-26 seq406 113 5e-20 seq1809 95.1 1e-14 >seq474 Length=16299 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| | Sbjct 149 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 208 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 209 TCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 267 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 268 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 327 Query 46583 AA 46584 || Sbjct 328 AA 329 >seq406 Length=19123 Score = 113 bits (124), Expect = 5e-20 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 ||||| || | || || ||||| ||||| ||||||||||| || |||||| | || || Sbjct 3048 ACCAGGTGTAGAGTGCTTTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGCCCATCTTCT 3107 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| || || ||||| || | ||||||||||| | || | | |||||||||| Sbjct 3108 AGCTGTTTACCAGCGAAGATGAGACGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGA 3167 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| |||||| | | | ||||| |||| || || |||| |||||||| Sbjct 3168 ATCTTTGTCTTGACATTGTCGATTGTGTCAGAGCTC---TCAACCTCCAGTGTGATGGTC 3224 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| || ||||| ||||| Sbjct 3225 TTTCCAGTTAGAGTTTTGACGAAGATCTGCAT 3256 Score = 113 bits (124), Expect = 5e-20 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || ||||||||||| ||||| || |||| || |||||||| || || || Sbjct 3833 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAA 3892 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | | |||||||||| ||||| |||||| ||| Sbjct 3893 GATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTGA-CGT 3951 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || ||||| || | |||||||| || || || Sbjct 3952 TGTCGATAGTATCGCTAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 4000 Score = 109 bits (120), Expect = 6e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| |||||||| | || || || ||||| || || || Sbjct 3522 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAG 3581 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||| | || | | |||||||||| ||||| |||||| ||| Sbjct 3582 ATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTGA-CGTT 3640 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||||| || ||||| || | ||||| || || || || || || || || Sbjct 3641 GTCGATAGTATCGCTAGACTCCACCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGAC 3700 Query 46582 AA 46583 || Sbjct 3701 AA 3702 >seq1809 Length=1036 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||| || |||||||| | || || Sbjct 664 CACAAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTC 723 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||| |||||||| |||| ||||||||||| | || | | ||||||||| || Sbjct 724 GAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTAT 783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565213034926800