Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq421 116 3e-21 >seq421 Length=18474 Score = 116 bits (128), Expect = 3e-21 Identities = 256/378 (68%), Gaps = 8/378 (2%) Strand=Plus/Plus Query 30010 TGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATG 30069 |||||||| || || ||||| ||| || |||||||| || ||| ||||||| Sbjct 5948 TGGCACGGCGGGAGCGCCATCTTCGCCAGATCCGCCGGGTTCCACGCCGACAGGATGATG 6007 Query 30070 CGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACGGCGTTTTGCAGCTGATCCACC 30126 || | ||| ||| | ||| | |||| | |||| | | |||||| || || Sbjct 6008 CGGCGGTCGAACGGGGT-TTCTT--TGAGCTTGCGCACGACCTCGGCCAGCTGGTCGACG 6064 Query 30127 CCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGG 30186 |||| |||| ||| || | | | |||| |||||| || |||||||||| ||||||| Sbjct 6065 CCCAGGCCCGTGTAATCGGTCTGCGCGTCCACGTACTCCGCCCCGAAATGCCGCCACTGG 6124 Query 30187 AACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTG-TCCAA 30245 ||||||||||| || |||||||| ||||| ||| |||| | ||||| | | |||| Sbjct 6125 AACCCGTACACGGGGCCCAGGTCGCCCTCGGCCCGGTGCGC-CAGCCCAACGCGATCCAG 6183 Query 30246 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGA 30305 || || | | |||||| ||||||||||||| | ||| | |||| ||| || Sbjct 6184 GAACTCGCGGCTCCCGTTGCCGTCCCAGATCTTGATCCCGGCCGCGGAAAGCGGGAGCGA 6243 Query 30306 GTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 30365 ||| | || || |||||| || || || ||| |||||| ||||| | Sbjct 6244 CGAGGTGCAGCCGGAGATGAACCAGAGGAGTTCGCCCAGGACGGCGCGGAGGAAGACGCG 6303 Query 30366 CTTGGTCGTGAGGAGGGG 30383 || || ||||||||||| Sbjct 6304 TTTTGTGGTGAGGAGGGG 6321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408599721703070