Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq406 105 5e-18 >seq406 Length=19123 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||||||||||||||| || ||||| || | | ||| | |||| || | |||| Sbjct 3282 TGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCGACAGAGTACGACCATCCTCAAGTTGC 3341 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | ||| || || || || || ||||| ||||||||||| || ||| Sbjct 3342 TTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTGGGATGCCCTCTTTATCTTGGATCTTT 3401 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || || | || | ||||| || | || || || || |||| || || || || Sbjct 3402 GTCTTGACGTTGTCGATTGTGTCGGAGCTCTCGACCTCCAGTGTGATGGTCTTTCCAGTG 3461 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || || || |||||||| Sbjct 3462 AGAGTCTTGACGAAGATCTGCAT 3484 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | |||||||| ||||| || || || ||||| |||| | ||| | | | Sbjct 3497 ACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCC 3556 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| |||| ||||||||| ||||| ||||||||||| || || || || || || || || Sbjct 3557 ATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTT 3616 Query 101374 ATCTTGAATTTT 101385 || ||||| || Sbjct 3617 GTCCTGAATCTT 3628 Score = 86.0 bits (94), Expect = 5e-12 Identities = 129/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || || || || || ||||| || ||||| |||| || ||| | | | || |||| ||| Sbjct 3822 TGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAGCTGC 3881 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||||||||| || || || || || || || || || ||||| || Sbjct 3882 TTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTG 3941 Query 101387 TGTTTTACAATTTCTACAGTGTC---AGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443 || || | || | ||| || |||| ||||| ||||| |||| || || ||| Sbjct 3942 GTCTTGACGTTGTCGATAGTATCGCTAGAC---TCCACCTCAAGGGTGATGGTCTTTCCG 3998 Query 101444 GT 101445 || Sbjct 3999 GT 4000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396261061581630