Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq792 122 2e-22 seq376 89.7 1e-12 >seq792 Length=9982 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| |||| | | |||||| | ||||| | | ||||||| | ||| |||| Sbjct 7704 CCCTGCATTACCAAGAAGGCTCAATGGGCTCTCAGGTGGATCCAGGATCAGGAATCTACC 7763 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| | | || || ||||| || |||||||| ||||| ||||||||| || || ||| Sbjct 7764 TTTGCCCAACGTCTCGTAGCTTTCGCTGCTGTTGAGGGTATCTTTTTCTCTGGCTCCTTT 7823 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989 || | ||||||||||| ||| || || ||||| || || ||| ||||||||| Sbjct 7824 GCCTCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACCTTCTCCAACGAG 7883 Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 |||||| | | || |||||||| |||| || ||||||||| |||| Sbjct 7884 CTCATCTCCCGTGATGAGGGTCTTCACACTGACTTTGCCTGCTTGCT 7930 >seq376 Length=20092 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || |||||||| || |||| || || | | ||| | ||| || ||| | || Sbjct 958 GTTGACAACTTGGAACTCGCCCGCAAGGACACGGCGAGAGTAGATGTTCGAGGTGTAAGG 1017 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || |||||| ||| ||||| ||| ||||||||||||||||| || || || Sbjct 1018 CTCGAAGCACTCGTTAAAGCCAAGGATTTGACTGGTGCTGGCGGTGGGCATAGGAGCAAC 1077 Query 221236 CAGCAGACTGTTGCGCA 221252 ||| ||||||||||||| Sbjct 1078 CAGAAGACTGTTGCGCA 1094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928803118089600