Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq217 134 2e-25 seq792 122 1e-21 seq11 122 1e-21 seq376 91.5 2e-12 >seq217 Length=27601 Score = 134 bits (148), Expect = 2e-25 Identities = 120/149 (81%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 19037 GCGCCAAGAG-GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAG 19095 ||| ||| || |||||||||||||| || || || |||||| |||||||| || | | Sbjct 16391 GCGACAACAGCGACAGCATCGGCGGTACCGTCACCTGCGTGATCCGCAACGTCCCCGTCG 16332 Query 19096 GCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGA 19155 |||| |||||||| ||||| |||||| |||||||| ||| |||||||||||||| | Sbjct 16331 GCCTGGGCGAGCCCTGCTTCGACAAGCTCGAGGCCAAGCTGGCCCACGCCATGCTCAGCA 16272 Query 19156 TCCCGGCCACCAAGGGATTCGAGATTGGC 19184 |||| ||||||||||| ||||| || ||| Sbjct 16271 TCCCCGCCACCAAGGGCTTCGAAATCGGC 16243 >seq792 Length=9982 Score = 122 bits (134), Expect = 1e-21 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || ||||| ||| ||| || |||||||||||||| | || ||||| Sbjct 8218 GCCTTCTGGTAATCACCCACACGCTTCTCAAAGAAGTTGGTCTTGCCAGCAAGGGAGATA 8159 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||| ||| ||| | | ||||| | | Sbjct 8158 GACTCCATGAAATCGAAGGGGTTGGTGGCATTGAAGTACTTCTTGTTGCCGAGAGCGACC 8099 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || |||||||| || || || || ||||||||||| || || ||||||||||| | Sbjct 8098 AGTAGACGGTCGGCAACGAATTCAATATACTGGCACATCAGATTGGAGTTCATGCCGAGG 8039 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | ||| ||| ||||| ||||| || | || ||||| | |||| Sbjct 8038 AGAGCACAAGGCAGAGCCTCTGTCAGGAACTCCTTCTCAATGGCAACAGCCTCAATGATG 7979 Query 868931 AT 868932 || Sbjct 7978 AT 7977 >seq11 Length=70361 Score = 122 bits (134), Expect = 1e-21 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| || |||||| |||| ||||| | || |||||| | || |||||| Sbjct 59515 GCCGCCAACTACCTTGATATCAAGGCTCTCCTCGACGTCGGCTGCAAGACCGTCGCCAAC 59574 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||| || ||||| ||||| ||||||||||| ||||| || ||| Sbjct 59575 ATGATCAAGGGCAAATCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 59629 >seq376 Length=20092 Score = 91.5 bits (100), Expect = 2e-12 Identities = 200/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| || || ||||| |||||||| || | || ||||| Sbjct 2059 CTGGTCAACGTATCTAGCAGTGTTATTGAACACGCGCAGCATGGGAACAATTCCATTGGA 2118 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||| ||||| || | | ||| | || | ||| || | || || | || Sbjct 2119 TGAGCCATTGGTACCGCCAATGTAAGAACCTGTGGCACGAATGCGATGGACGTTGAGACC 2178 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | |||||| || | || ||| || || ||||||||||||||||| Sbjct 2179 AATACCACCGGCAGTCTTGGAAATCATAGCACACGTCTTCAGTGTGTCGTAGATGCCCTC 2238 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| || | ||||| || | || || || | || || Sbjct 2239 AATGCTGTCCTCCTTCATGTCAACCAAGAAGCAGGATGCCAGCTGAGGCTGGGGGGTACC 2298 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || ||||| | || ||||| ||| | | |||||| || |||||| Sbjct 2299 AGCATTGAACAGAGTGGGGGAAGCATGTGTGAAGTACTTCTGGGACATGAGGTTGTAGGT 2358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106844587788030