Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20ochraceoroseus_20[genbank_20GCA_5F000986665.1_202015- 04-30] 3,590 sequences; 24,273,657 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq406 123 5e-23 >seq406 Length=19123 Score = 123 bits (136), Expect = 5e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | ||| || ||||||||||| || || || || || | Sbjct 3256 TACCACCACGCAGACGGAGCACAAGGTGAAGGGTAGATTCTTTTTGGATGTTGTAGTCCG 3315 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| || || ||||| |||||||| ||||| || | ||| || ||||| | Sbjct 3316 ACAGAGTACGACCATCCTCAAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGTG 3375 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || || || |||||||| ||||||| || || || || || || || || | || Sbjct 3376 GGATGCCCTCTTTATCTTGGATCTTTGTCTTGACGTTGTCGATTGTGTC-GGAGCTCTCG 3434 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||| || || ||||| || || | ||||| || || |||||||| Sbjct 3435 ACCTCCAGTGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAGATCTGCAT 3484 Score = 104 bits (114), Expect = 5e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||||||||| | ||| || || ||||| ||||| || || || || || Sbjct 3486 CCACCACGCAGACGCAGAACCAGGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 3545 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || || || ||||| || ||||||||||| | | || || || || || Sbjct 3546 AGAGTGCGGCCATCCTCCAGTTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 3605 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || |||||||| | || || || || || ||||| ||| || || Sbjct 3606 ATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACC 3665 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 || | || || ||||| || || | ||||| |||| Sbjct 3666 TCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACAA 3702 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || | ||| ||||| || || || || || || || || || Sbjct 3798 CCACCACGCAGACGGAGGACCAGGTGGAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAG 3857 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | |||||||| || || || ||||||||||| | | || || || || || Sbjct 3858 AGAGTACGGCCGTCTTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCAGGGGGG 3917 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || |||||||| | || || || || || ||||| ||| || || Sbjct 3918 ATACCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTATCGCTAGACTCCACC 3977 Query 82764 TCCAAAGTTATCGTCTTGCCTGT 82786 || | || || ||||| || || Sbjct 3978 TCAAGGGTGATGGTCTTTCCGGT 4000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981782039017010